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    CLEC5A C-type lectin domain containing 5A [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100589404, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CLEC5A
    Gene description
    C-type lectin domain containing 5A
    See related
    EnsemblRapid:ENSNLEG00000002394
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs
    human mouse all
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    Genomic context

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    See CLEC5A in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (90914106..90933703, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (93310023..93328276, complement)

    Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene putative olfactory receptor 9A1 Neighboring gene olfactory receptor 9A4 Neighboring gene taste 2 receptor member 38 Neighboring gene maltase-glucoamylase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables virus receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-type lectin domain family 5 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      90914106..90933703 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003270832.2 → XP_003270880.1  C-type lectin domain family 5 member A isoform X1

      UniProtKB/TrEMBL
      G1QPR2
      Related
      ENSNLEP00000002928.1, ENSNLET00000003077.3
      Conserved Domains (1) summary
      cd03593
      Location:71 → 185
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    2. XM_003270833.3 → XP_003270881.1  C-type lectin domain family 5 member A isoform X3

      UniProtKB/TrEMBL
      A0A2I3GYN8
      Related
      ENSNLEP00000036342.1, ENSNLET00000057954.2
      Conserved Domains (1) summary
      cd03593
      Location:48 → 162
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    3. XM_012512144.1 → XP_012367598.1  C-type lectin domain family 5 member A isoform X2

      Conserved Domains (1) summary
      cd03593
      Location:71 → 184
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    Nucleotide Protein
    Heading Accession and Version

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