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    LOC100501715 uncharacterized LOC100501715 [ Zea mays ]

    Gene ID: 100501715, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100501715
    Gene description
    uncharacterized LOC100501715
    Locus tag
    ZEAMMB73_Zm00001d018982
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G021303
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    Genomic context

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    See LOC100501715 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (11676013..11678335)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (11815292..11817614)

    Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene histone H1-like protein Neighboring gene uncharacterized LOC103632031 Neighboring gene Serine/threonine-protein kinase WNK2 Neighboring gene YlmG homolog protein 1-2 chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100501715

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001196385.1 → NP_001183314.1  uncharacterized protein LOC100501715

      See identical proteins and their annotated locations for NP_001183314.1

      Status: PREDICTED

      Source sequence(s)
      BT086047
      UniProtKB/TrEMBL
      C4J5F0
      Conserved Domains (3) summary
      sd00004
      Location:140 → 167
      PPR; PPR repeat [structural motif]
      pfam12854
      Location:133 → 165
      PPR_1; PPR repeat
      pfam13041
      Location:136 → 185
      PPR_2; PPR repeat family

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      11676013..11678335
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials