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    LOC100383723 uncharacterized LOC100383723 [ Zea mays ]

    Gene ID: 100383723, updated on 14-Dec-2023

    Summary

    Gene symbol
    LOC100383723
    Gene description
    uncharacterized LOC100383723
    Locus tag
    ZEAMMB73_Zm00001d051242
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G120373
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    Genomic context

    See LOC100383723 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 4 NC_050099.1 (151893424..151913025)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 4 NC_024462.2 (150058264..150077862)

    Chromosome 4 - NC_050099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109945658 Neighboring gene WD repeat-containing protein 44 Neighboring gene succinate dehydrogenase assembly factor 1, mitochondrial-like Neighboring gene uncharacterized LOC103653834

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    RNA polymerase II C-terminal domain phosphatase-like 1-like; uncharacterized protein LOC100383723
    Names
    RNA polymerase II C-terminal domain phosphatase-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001321632.1NP_001308561.1  RNA polymerase II C-terminal domain phosphatase-like 1-like

      Status: VALIDATED

      Source sequence(s)
      BT068117, CABHLF010000003, DR800777
      UniProtKB/TrEMBL
      A0A1D6Q5T3, K7UXF1
      Conserved Domains (2) summary
      pfam00035
      Location:692753
      dsrm; Double-stranded RNA binding motif
      cl21460
      Location:248364
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050099.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      151893424..151913025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020551689.2XP_020407278.1  uncharacterized protein LOC100383723 isoform X1

      UniProtKB/TrEMBL
      A0A1D6Q5T3, A0A1D6Q5T8
      Conserved Domains (2) summary
      pfam00035
      Location:692753
      dsrm; Double-stranded RNA binding motif
      cl21460
      Location:248364
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    RNA

    1. XR_002268640.3 RNA Sequence

    2. XR_002268641.2 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001176360.1: Suppressed sequence

      Description
      NM_001176360.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.