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    Wnt9 wingless-type MMTV integration site family, member 9 [ Saccoglossus kowalevskii ]

    Gene ID: 100313766, updated on 19-Oct-2023

    Summary

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    Gene symbol
    Wnt9
    Gene description
    wingless-type MMTV integration site family, member 9
    See related
    EnsemblRapid:GeneID_100313766
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccoglossus kowalevskii
    Lineage
    Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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    Genomic context

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    See Wnt9 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003145794.1 (122715..139586, complement)

    NW_003145794.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase family member 11-like Neighboring gene wingless-type MMTV integration site family, member 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003145794 unplaced scaffold reference Skow_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    wingless-type MMTV integration site family, member 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001168207.1 → NP_001161679.1  wingless-type MMTV integration site family, member 9

      See identical proteins and their annotated locations for NP_001161679.1

      Status: PROVISIONAL

      Source sequence(s)
      GU076163
      UniProtKB/TrEMBL
      D1LXI6
      Related
      NP_001161679.1, NM_001168207.1
      Conserved Domains (1) summary
      pfam00110
      Location:46 → 354
      wnt; wnt family

    RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Skow_1.1 Primary Assembly

    Genomic

    1. NW_003145794.1 Reference Skow_1.1 Primary Assembly

      Range
      122715..139586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006822664.1 → XP_006822727.1  wingless-type MMTV integration site family, member 9

      Related
      XP_006822727.1, XM_006822664.1
      Conserved Domains (1) summary
      pfam00110
      Location:46 → 354
      wnt; wnt family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials