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    LOC100283251 seed specific protein Bn15D17A [ Zea mays ]

    Gene ID: 100283251, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100283251
    Gene description
    seed specific protein Bn15D17A
    Locus tag
    ZEAMMB73_Zm00001d038717
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G386674
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    Genomic context

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    See LOC100283251 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (170592731..170594060, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 6 NC_024464.2 (163280094..163281423, complement)

    Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100281941 Neighboring gene meiotic recombination protein DMC1 homolog B-like Neighboring gene F-box/LRR-repeat protein 12-like Neighboring gene hemoglobin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    seed specific protein Bn15D17A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001156153.2 → NP_001149625.2  seed specific protein Bn15D17A

      Status: VALIDATED

      Source sequence(s)
      CABHLF010000009, CB240051, CB251907, FL429810
      UniProtKB/TrEMBL
      A0A1D6M9Z4, A0A3L6E5Z0
      Conserved Domains (1) summary
      pfam03195
      Location:5 → 105
      LOB; Lateral organ boundaries (LOB) domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      170592731..170594060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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