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    LOC100266680 BEL1-like homeodomain protein 9 [ Vitis vinifera (wine grape) ]

    Gene ID: 100266680, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100266680
    Gene description
    BEL1-like homeodomain protein 9
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    Also known as
    GO:0003700 GO:0003677 GO:0005634 GO:0006355 GO:0045449
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    Genomic context

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    See LOC100266680 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 8 NC_081812.1 (16550737..16556731, complement)
    102 previous assembly 12X (GCF_000003745.3) 8 NC_012014.3 (15381711..15387710, complement)

    Chromosome 8 - NC_081812.1Genomic Context describing neighboring genes Neighboring gene microRNA MIR2111 Neighboring gene uncharacterized LOC100244349 Neighboring gene aldehyde oxidase GLOX Neighboring gene protein NRT1/ PTR FAMILY 5.6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BEL1-like homeodomain protein 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081812.1 Reference ASM3070453v1 Primary Assembly

      Range
      16550737..16556731 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010655932.3 → XP_010654234.1  BEL1-like homeodomain protein 9

      UniProtKB/TrEMBL
      A5AHA1, F6HL25
      Conserved Domains (2) summary
      smart00574
      Location:242 → 373
      POX; domain associated with HOX domains
      pfam05920
      Location:437 → 476
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein
    Heading Accession and Version

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