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    LOC100263653 uncharacterized LOC100263653 [ Vitis vinifera (wine grape) ]

    Gene ID: 100263653, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC100263653
    Gene description
    uncharacterized LOC100263653
    Locus tag
    VIT_00012887001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    Also known as
    GO:0008270 GO:0046872 GO:0005515
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    Genomic context

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    See LOC100263653 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 11 NC_081815.1 (6510741..6518949)
    102 previous assembly 12X (GCF_000003745.3) 11 NC_012017.3 (6533735..6542106)

    Chromosome 11 - NC_081815.1Genomic Context describing neighboring genes Neighboring gene 116 kDa U5 small nuclear ribonucleoprotein component-like Neighboring gene uncharacterized LOC132254659 Neighboring gene uncharacterized LOC100263642 Neighboring gene 5.8S ribosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100263653
    Names
    E3 ubiquitin-protein ligase RLIM

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081815.1 Reference ASM3070453v1 Primary Assembly

      Range
      6510741..6518949
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059740659.1 → XP_059596642.1  uncharacterized protein LOC100263653 isoform X1

    2. XM_002266397.5 → XP_002266433.1  uncharacterized protein LOC100263653 isoform X2

      UniProtKB/TrEMBL
      A5BCM9, F6HCI6
      Conserved Domains (1) summary
      pfam13639
      Location:479 → 522
      zf-RING_2; Ring finger domain
    Nucleotide Protein
    Heading Accession and Version

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