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    LOC100248794 transcription factor bHLH67 [ Vitis vinifera (wine grape) ]

    Gene ID: 100248794, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100248794
    Gene description
    transcription factor bHLH67
    Locus tag
    VIT_00027446001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    Also known as
    GO:0030528 GO:0003677 GO:0005634 GO:0045449
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    Genomic context

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    See LOC100248794 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 15 NC_081819.1 (19702151..19704915, complement)
    102 previous assembly 12X (GCF_000003745.3) 15 NC_012021.3 (16674166..16676927, complement)

    Chromosome 15 - NC_081819.1Genomic Context describing neighboring genes Neighboring gene cathecol O-methyltransferase 1 Neighboring gene protein CURVATURE THYLAKOID 1B, chloroplastic Neighboring gene metal tolerance protein 1 Neighboring gene NDR1/HIN1-like protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in guard cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor bHLH67; transcription factor bHLH70

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081819.1 Reference ASM3070453v1 Primary Assembly

      Range
      19702151..19704915 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002267783.5 → XP_002267819.2  transcription factor bHLH67 isoform X1

      Conserved Domains (1) summary
      pfam00010
      Location:213 → 264
      HLH; Helix-loop-helix DNA-binding domain

    2. XM_010663202.3 → XP_010661504.1  transcription factor bHLH70 isoform X2

      UniProtKB/TrEMBL
      F6I2Y8
      Conserved Domains (1) summary
      pfam00010
      Location:155 → 206
      HLH; Helix-loop-helix DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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