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    LOC100242886 uncharacterized LOC100242886 [ Vitis vinifera (wine grape) ]

    Gene ID: 100242886, updated on 29-Sep-2023

    Summary

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    Gene symbol
    LOC100242886
    Gene description
    uncharacterized LOC100242886
    Locus tag
    VIT_00032987001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100242886 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 14 NC_081818.1 (24789684..24792594, complement)
    102 previous assembly 12X (GCF_000003745.3) 14 NC_012020.3 (24882625..24885532, complement)

    Chromosome 14 - NC_081818.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104881642 Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 Neighboring gene alpha-mannosidase At3g26720 Neighboring gene probable alpha-mannosidase At5g13980

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100242886

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081818.1 Reference ASM3070453v1 Primary Assembly

      Range
      24789684..24792594 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002275696.3 → XP_002275732.1  uncharacterized protein LOC100242886

      UniProtKB/TrEMBL
      A0A438ECC9, F6H429
      Conserved Domains (1) summary
      pfam15264
      Location:289 → 343
      TSSC4; Tumour suppressing sub-chromosomal transferable candidate 4
    Nucleotide Protein
    Heading Accession and Version

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