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    LOC100182745 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 100182745, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC100182745
    Gene description
    guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
    See related
    Ensembl:ENSCING00000003768
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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    Genomic context

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    See LOC100182745 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 7 NC_020172.2 (79579..84517, complement)

    Chromosome 7 - NC_020172.2Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 14 Neighboring gene fibronectin type-III domain-containing protein 3A-like Neighboring gene uncharacterized LOC104265796 Neighboring gene major facilitator superfamily domain-containing protein 8-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_020172.2 Chromosome 7 Reference KH Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor complex adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of heterotrimeric G-protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020172.2 Reference KH Primary Assembly

      Range
      79579..84517 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002127260.5 → XP_002127296.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

      UniProtKB/TrEMBL
      A0A1W2WDN3, F7AW67
      Related
      ENSCINP00000007802
      Conserved Domains (3) summary
      COG2319
      Location:56 → 347
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:55 → 347
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:65 → 102
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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