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    SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173831, updated on 26-Mar-2024

    Summary

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    Gene symbol
    SUCLG1
    Gene description
    succinate-CoA ligase GDP/ADP-forming subunit alpha
    Locus tag
    CR201_G0035639
    See related
    Ensembl:ENSPPYG00000035009 Ensembl:ENSPPYG00000040003
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See SUCLG1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 12 NC_071997.2 (47641817..47677684)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 2A NC_071986.1 (44227262..44263129)

    Chromosome 12 - NC_071997.2Genomic Context describing neighboring genes Neighboring gene 60 kDa heat shock protein, mitochondrial-like Neighboring gene L-lactate dehydrogenase A chain-like Neighboring gene dynein axonemal heavy chain 6 Neighboring gene FUN14 domain-containing protein 2-like Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • DKFZp459A0327

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables succinate-CoA ligase (ADP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate-CoA ligase (GDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of succinate-CoA ligase complex (ADP-forming) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
    Names
    succinate-CoA ligase alpha subunit
    NP_001126825.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001133353.1 → NP_001126825.1  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial

      See identical proteins and their annotated locations for NP_001126825.1

      Status: PROVISIONAL

      Source sequence(s)
      CR860980
      UniProtKB/TrEMBL
      A0A2J8TE84, A0A8I5YNN1, Q5R584
      Related
      ENSPPYP00000037164.1, ENSPPYT00000034611.1
      Conserved Domains (3) summary
      PTZ00187
      Location:19 → 344
      PTZ00187; succinyl-CoA synthetase alpha subunit; Provisional
      pfam00549
      Location:199 → 324
      Ligase_CoA; CoA-ligase
      pfam02629
      Location:53 → 146
      CoA_binding; CoA binding domain

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071997.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      47641817..47677684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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