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    ARFGAP2 ARF GTPase activating protein 2 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100172577, updated on 20-Sep-2024

    Summary

    Gene symbol
    ARFGAP2
    Gene description
    ARF GTPase activating protein 2
    Locus tag
    CR201_G0010920
    See related
    Ensembl:ENSPPYG00000003313
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Also known as
    ZNF289
    Orthologs
    NEW
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    Genomic context

    See ARFGAP2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 9 NC_071994.2 (19949832..19977407)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 11 NC_071996.1 (19927487..19949542)

    Chromosome 9 - NC_071994.2Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS10-like Neighboring gene 5E5 antigen-like Neighboring gene protein kinase C and casein kinase substrate in neurons 3 Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene ATPase Get3-like Neighboring gene uncharacterized LOC129048912 Neighboring gene LDL receptor related protein 4

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • DKFZp468O045

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in COPI coating of Golgi vesicle IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ADP-ribosylation factor GTPase-activating protein 2
    Names
    ADP ribosylation factor GTPase activating protein 2
    ARF GAP 2
    GTPase-activating protein ZNF289
    zinc finger protein 289

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132185.1NP_001125657.1  ADP-ribosylation factor GTPase-activating protein 2

      See identical proteins and their annotated locations for NP_001125657.1

      Status: PROVISIONAL

      Source sequence(s)
      CR858925
      UniProtKB/Swiss-Prot
      Q5R6A6, Q5RAT7
      Related
      ENSPPYP00000003801.1, ENSPPYT00000003948.2
      Conserved Domains (3) summary
      PLN03114
      Location:1471
      PLN03114; ADP-ribosylation factor GTPase-activating protein AGD10; Provisional
      pfam01412
      Location:11117
      ArfGap; Putative GTPase activating protein for Arf
      cl23720
      Location:227299
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071994.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      19949832..19977407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024254483.3XP_024110251.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8I5TSI2
      Related
      ENSPPYP00000040587.1
      Conserved Domains (2) summary
      pfam01412
      Location:11117
      ArfGap; Putative GTPase activating protein for Arf
      cl23720
      Location:227299
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
    2. XM_054523722.2XP_054379697.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X1

    3. XM_054523725.2XP_054379700.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X4

    4. XM_054523724.2XP_054379699.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X3

    5. XM_054523726.2XP_054379701.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A2J8WF24, A0A8I5YLZ0