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    SLC25A20 solute carrier family 25 member 20 [ Ovis aries (sheep) ]

    Gene ID: 100147786, updated on 10-Oct-2024

    Summary

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    Gene symbol
    SLC25A20
    Gene description
    solute carrier family 25 member 20
    See related
    EnsemblRapid:ENSOARG00020022821
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC25A20 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 19 NC_056072.1 (51090363..51128262)

    Chromosome 19 - NC_056072.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase, transmembrane Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene adenosine 5'-monophosphoramidase HINT1-like Neighboring gene large ribosomal subunit protein eL39-like Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene inositol hexakisphosphate kinase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056072.1 Chromosome 19 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome resource to address mechanisms of developmental programming: determination of the fetal sheep heart transcriptome. Cox LA, et al. J Physiol, 2012 Jun 15. PMID 22508961, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyl carnitine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables low-density lipoprotein particle binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carnitine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial carnitine/acylcarnitine carrier protein
    Names
    solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
    NP_001120749.1
    XP_042091644.1
    XP_060257999.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127277.1 → NP_001120749.1  mitochondrial carnitine/acylcarnitine carrier protein

      See identical proteins and their annotated locations for NP_001120749.1

      Status: PROVISIONAL

      Source sequence(s)
      EU626214
      UniProtKB/TrEMBL
      A0A6P3CWW3, B2MVX5, W5Q3I3
      Related
      ENSOARP00020035290.1, ENSOART00020076370.1
      Conserved Domains (2) summary
      PTZ00169
      Location:11 → 277
      PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
      pfam00153
      Location:106 → 198
      Mito_carr; Mitochondrial carrier protein

    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056072.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      51090363..51128262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060402016.1 → XP_060257999.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    2. XM_042235710.1 → XP_042091644.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

      UniProtKB/TrEMBL
      W5Q3I3
      Related
      ENSOARP00020029292.2, ENSOART00020035454.2
      Conserved Domains (1) summary
      PTZ00169
      Location:11 → 277
      PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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