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    PGC progastricsin [ Papio anubis (olive baboon) ]

    Gene ID: 100137209, updated on 8-Mar-2024

    Summary

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    Gene symbol
    PGC
    Gene description
    progastricsin
    See related
    Ensembl:ENSPANG00000001300
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Papio anubis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
    Orthologs
    human mouse all
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    Genomic context

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    See PGC in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current Panubis1.0 (GCF_008728515.1) 6 NC_044981.1 (40121944..40135920, complement)
    103 previous assembly Panu_3.0 (GCF_000264685.3) 4 NC_018155.2 (41208637..41223059, complement)

    Chromosome 6 - NC_044981.1Genomic Context describing neighboring genes Neighboring gene MyoD family inhibitor Neighboring gene transcription factor EB Neighboring gene fibroblast growth factor receptor substrate 3 Neighboring gene prickle planar cell polarity protein 4 Neighboring gene translocase of outer mitochondrial membrane 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gastricsin
    NP_001162218.1
    XP_009203394.1
    XP_009203395.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001168747.1 → NP_001162218.1  gastricsin precursor

      See identical proteins and their annotated locations for NP_001162218.1

      Status: INFERRED

      Source sequence(s)
      DP000458
      UniProtKB/TrEMBL
      A8MN26
      Related
      ENSPANP00000012632.1, ENSPANT00000019922.3
      Conserved Domains (3) summary
      cd05477
      Location:70 → 387
      gastricsin; Gastricsins, asparate proteases produced in gastric mucosa
      pfam00026
      Location:72 → 387
      Asp; Eukaryotic aspartyl protease
      pfam07966
      Location:18 → 46
      A1_Propeptide; A1 Propeptide

    RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Panubis1.0 Primary Assembly

    Genomic

    1. NC_044981.1 Reference Panubis1.0 Primary Assembly

      Range
      40121944..40135920 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009205130.3 → XP_009203394.1  gastricsin isoform X1

      Conserved Domains (2) summary
      cd05477
      Location:38 → 355
      gastricsin; Gastricsins, asparate proteases produced in gastric mucosa
      pfam00026
      Location:40 → 355
      Asp; Eukaryotic aspartyl protease

    2. XM_009205131.4 → XP_009203395.1  gastricsin isoform X2

      UniProtKB/TrEMBL
      A0A2I3MH01
      Related
      ENSPANP00000034870.1, ENSPANT00000036857.2
      Conserved Domains (2) summary
      pfam07966
      Location:18 → 46
      A1_Propeptide; A1 Propeptide
      cl11403
      Location:70 → 215
      pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
    Nucleotide Protein
    Heading Accession and Version

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