Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR

Cell Rep. 2020 Jul 21;32(3):107909. doi: 10.1016/j.celrep.2020.107909.

Abstract

Sprouty-related, EVH1 domain-containing (SPRED) proteins negatively regulate RAS/mitogen-activated protein kinase (MAPK) signaling following growth factor stimulation. This inhibition of RAS is thought to occur primarily through SPRED1 binding and recruitment of neurofibromin, a RasGAP, to the plasma membrane. Here, we report the structure of neurofibromin (GTPase-activating protein [GAP]-related domain) complexed with SPRED1 (EVH1 domain) and KRAS. The structure provides insight into how the membrane targeting of neurofibromin by SPRED1 allows simultaneous interaction with activated KRAS. SPRED1 and NF1 loss-of-function mutations occur across multiple cancer types and developmental diseases. Analysis of the neurofibromin-SPRED1 interface provides a rationale for mutations observed in Legius syndrome and suggests why SPRED1 can bind to neurofibromin but no other RasGAPs. We show that oncogenic EGFR(L858R) signaling leads to the phosphorylation of SPRED1 on serine 105, disrupting the SPRED1-neurofibromin complex. The structural, biochemical, and biological results provide new mechanistic insights about how SPRED1 interacts with neurofibromin and regulates active KRAS levels in normal and pathologic conditions.

Keywords: Legius syndrome; RAS-RAF-ERK pathway; RASopathy; RasGAP; neurofibromatosis type 1.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adaptor Proteins, Signal Transducing / chemistry*
  • Adaptor Proteins, Signal Transducing / metabolism*
  • Amino Acid Sequence
  • Cafe-au-Lait Spots / genetics
  • Catalytic Domain
  • DNA Mutational Analysis
  • Epidermal Growth Factor / pharmacology
  • ErbB Receptors / metabolism*
  • Guanosine Triphosphate / metabolism
  • HEK293 Cells
  • Humans
  • K562 Cells
  • Neurofibromatosis 1 / genetics
  • Neurofibromin 1 / chemistry*
  • Neurofibromin 1 / genetics
  • Neurofibromin 1 / metabolism*
  • Oncogenes*
  • Phosphorylation
  • Point Mutation / genetics
  • Protein Binding
  • Protein Domains
  • Protein Interaction Maps
  • Proto-Oncogene Proteins p21(ras) / chemistry*
  • Proto-Oncogene Proteins p21(ras) / genetics
  • Signal Transduction

Substances

  • Adaptor Proteins, Signal Transducing
  • KRAS protein, human
  • Neurofibromin 1
  • SPRED1 protein, human
  • Epidermal Growth Factor
  • Guanosine Triphosphate
  • ErbB Receptors
  • Proto-Oncogene Proteins p21(ras)

Supplementary concepts

  • Legius syndrome