Salt-bridge modulates differential calcium-mediated ligand binding to integrin α1- and α2-I domains

Sci Rep. 2018 Feb 13;8(1):2916. doi: 10.1038/s41598-018-21231-1.

Abstract

Integrins are transmembrane cell-extracellular matrix adhesion receptors that impact many cellular functions. A subgroup of integrins contain an inserted (I) domain within the α-subunits (αI) that mediate ligand recognition where function is contingent on binding a divalent cation at the metal ion dependent adhesion site (MIDAS). Ca2+ is reported to promote α1I but inhibit α2I ligand binding. We co-crystallized individual I-domains with MIDAS-bound Ca2+ and report structures at 1.4 and 2.15 Å resolution, respectively. Both structures are in the "closed" ligand binding conformation where Ca2+ induces minimal global structural changes. Comparisons with Mg2+-bound structures reveal Mg2+ and Ca2+ bind α1I in a manner sufficient to promote ligand binding. In contrast, Ca2+ is displaced in the α2I domain MIDAS by 1.4 Å relative to Mg2+ and unable to directly coordinate all MIDAS residues. We identified an E152-R192 salt bridge hypothesized to limit the flexibility of the α2I MIDAS, thus, reducing Ca2+ binding. A α2I E152A construct resulted in a 10,000-fold increase in Mg2+ and Ca2+ binding affinity while increasing binding to collagen ligands 20%. These data indicate the E152-R192 salt bridge is a key distinction in the molecular mechanism of differential ion binding of these two I domains.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Calcium / metabolism*
  • Hydrogen Bonding
  • Integrin alpha1 / chemistry*
  • Integrin alpha1 / metabolism*
  • Integrin alpha2 / chemistry*
  • Integrin alpha2 / metabolism*
  • Ligands
  • Models, Molecular
  • Protein Binding
  • Protein Domains
  • Thermodynamics

Substances

  • Integrin alpha1
  • Integrin alpha2
  • Ligands
  • Calcium