Comparative analysis of Borrelia isolates from southeastern USA based on randomly amplified polymorphic DNA fingerprint and 16S ribosomal gene sequence analyses

FEMS Microbiol Lett. 2003 Nov 21;228(2):249-57. doi: 10.1016/S0378-1097(03)00763-8.

Abstract

Fifty-three southern USA Borrelia isolates were characterized using randomly amplified polymorphic DNA fingerprinting analysis (RAPD). Twenty-nine types were recognized among 37 B. andersonii strains, seven types among eight B. bissettii strains, and seven types among seven B. burgdorferi sensu stricto strains. Strain TXW-1 formed a separate RAPD type. Nearly complete sequences of the rrs genes from 17 representative southern Borrelia were determined. The similarity values were found to be 96-100% within the B. burgdorferi sensu lato (s.l.) complex, 94-99% among the relapsing fever borreliae, and 93-99% between the two complexes. Phylogenetic analysis indicated that all the Borrelia strains we analyzed could be divided into two parts: the B. burgdorferi s.l. complex and the relapsing fever borreliae complex. TXW-1 segregated with the North American relapsing fever borreliae and formed a separate subbranch.

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Arachnid Vectors / microbiology
  • Borrelia / classification*
  • Borrelia / genetics
  • Borrelia / growth & development
  • Borrelia / isolation & purification
  • Borrelia burgdorferi / classification
  • Borrelia burgdorferi / genetics
  • Borrelia burgdorferi / isolation & purification
  • Borrelia burgdorferi Group / classification*
  • Borrelia burgdorferi Group / genetics
  • Borrelia burgdorferi Group / growth & development
  • Borrelia burgdorferi Group / isolation & purification
  • DNA Fingerprinting
  • DNA, Bacterial / analysis
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / analysis
  • DNA, Ribosomal / isolation & purification
  • Disease Reservoirs
  • Genes, rRNA
  • Genotype
  • Lyme Disease / microbiology
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Random Amplified Polymorphic DNA Technique*
  • Relapsing Fever / microbiology
  • Sequence Analysis, DNA
  • Southeastern United States
  • Ticks / microbiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S