Edge Substitution Effects of Histidine Tautomerization Behaviors on the Structural Properties and Aggregation Properties of Aβ(1-42) Mature Fibril

ACS Chem Neurosci. 2024 Mar 6;15(5):1055-1062. doi: 10.1021/acschemneuro.4c00027. Epub 2024 Feb 20.

Abstract

Histidine behaviors play critical roles in folding and misfolding processes due to the changes in net charge and the various N/N-H orientations on imidazole rings. However, the effect of histidine tautomerization (HIE (Nε-H, ε) and HID (Nδ-H, δ) states) behaviors on the edge chain of Aβ mature fibrils remains inadequately understood, which is critical for finding a strategy to disturb fibril elongation and growth. In the current study, eight independent molecular dynamics simulations were conducted to investigate such impacts on the structural and aggregation properties. Our results from three different binding models revealed that the binding contributions of edge substitution effects are primarily located between chains 1 and 2. Histidine states significantly influence the secondary structure of each domain. Further analysis confirmed that the C1_H6//C1_E11 intrachain interaction is essential in maintaining the internal stability of chain 1, while the C1_H13//C2_H13 and C1_H14//C2_H13 interchain interactions are critical in maintaining the interchain stability of the fibril structure. Our subsequent analysis revealed that the current edge substitution leads to the loss of the C1_H13//C1_E11 intrachain and C1_H13//C2_H14 interchain interactions. The N-terminal regularity was significantly directly influenced by histidine states, particularly by the residue of C1_H13. Our study provides valuable insights into the effect of histidine behaviors on the edge chain of Aβ mature fibril, advancing our understanding of the histidine behavior hypothesis in misfolding diseases.

Keywords: AD hypothesis; AD pathogenesis; aggregation mechanism; deprotonated and protonated states; histidine behaviors; misfolding mechanisms; protein folding and misfolding.

MeSH terms

  • Amyloid beta-Peptides* / metabolism
  • Histidine* / chemistry
  • Molecular Dynamics Simulation
  • Peptide Fragments / metabolism
  • Protein Aggregates

Substances

  • Amyloid beta-Peptides
  • amyloid beta-protein (1-42)
  • Histidine
  • Peptide Fragments
  • Protein Aggregates