Objective differential diagnosis of Noonan and Williams-Beuren syndromes in diverse populations using quantitative facial phenotyping

Mol Genet Genomic Med. 2021 May;9(5):e1636. doi: 10.1002/mgg3.1636. Epub 2021 Mar 27.

Abstract

Introduction: Patients with Noonan and Williams-Beuren syndrome present similar facial phenotypes modulated by their ethnic background. Although distinctive facial features have been reported, studies show a variable incidence of those characteristics in populations with diverse ancestry. Hence, a differential diagnosis based on reported facial features can be challenging. Although accurate diagnoses are possible with genetic testing, they are not available in developing and remote regions.

Methods: We used a facial analysis technology to identify the most discriminative facial metrics between 286 patients with Noonan and 161 with Williams-Beuren syndrome with diverse ethnic background. We quantified the most discriminative metrics, and their ranges both globally and in different ethnic groups. We also created population-based appearance images that are useful not only as clinical references but also for training purposes. Finally, we trained both global and ethnic-specific machine learning models with previous metrics to distinguish between patients with Noonan and Williams-Beuren syndromes.

Results: We obtained a classification accuracy of 85.68% in the global population evaluated using cross-validation, which improved to 90.38% when we adapted the facial metrics to the ethnicity of the patients (p = 0.024).

Conclusion: Our facial analysis provided for the first time quantitative reference facial metrics for the differential diagnosis Noonan and Williams-Beuren syndromes in diverse populations.

Keywords: Noonan; Williams-Beuren; facial analysis; facial phenotyping; machine learning.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Automated Facial Recognition / methods*
  • Automated Facial Recognition / standards
  • Child
  • Child, Preschool
  • Diagnosis, Computer-Assisted / methods*
  • Diagnosis, Computer-Assisted / standards
  • Diagnosis, Differential
  • Face / pathology*
  • Female
  • Humans
  • Infant
  • Machine Learning
  • Male
  • Noonan Syndrome / diagnosis*
  • Phenotype*
  • Sensitivity and Specificity
  • Williams Syndrome / diagnosis*