The mechanism of activation of the actin binding protein EHBP1 by Rab8 family members

Nat Commun. 2020 Aug 21;11(1):4187. doi: 10.1038/s41467-020-17792-3.

Abstract

EHBP1 is an adaptor protein that regulates vesicular trafficking by recruiting Rab8 family members and Eps15-homology domain-containing proteins 1/2 (EHD1/2). It also links endosomes to the actin cytoskeleton. However, the underlying molecular mechanism of activation of EHBP1 actin-binding activity is unclear. Here, we show that both termini of EHBP1 have membrane targeting potential. EHBP1 associates with PI(3)P, PI(5)P, and phosphatidylserine via its N-terminal C2 domain. We show that in the absence of Rab8 family members, the C-terminal bivalent Mical/EHBP Rab binding (bMERB) domain forms an intramolecular complex with its central calponin homology (CH) domain and auto-inhibits actin binding. Rab8 binding to the bMERB domain relieves this inhibition. We have analyzed the CH:bMERB auto-inhibited complex and the active bMERB:Rab8 complex biochemically and structurally. Together with structure-based mutational studies, this explains how binding of Rab8 frees the CH domain and allows it to interact with the actin cytoskeleton, leading to membrane tubulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actin Cytoskeleton / metabolism
  • Adaptor Proteins, Signal Transducing / chemistry
  • Adaptor Proteins, Signal Transducing / metabolism
  • Carrier Proteins / chemistry*
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism*
  • Microfilament Proteins / chemistry*
  • Microfilament Proteins / genetics
  • Microfilament Proteins / metabolism*
  • Models, Molecular
  • Phosphatidylinositol Phosphates / metabolism
  • Protein Binding
  • Protein Conformation
  • Protein Domains
  • Protein Interaction Domains and Motifs
  • Protein Transport / physiology
  • Sequence Alignment
  • Vesicular Transport Proteins
  • rab GTP-Binding Proteins / chemistry*
  • rab GTP-Binding Proteins / genetics
  • rab GTP-Binding Proteins / metabolism*

Substances

  • Adaptor Proteins, Signal Transducing
  • Carrier Proteins
  • EHBP1 protein, human
  • EHD1 protein, human
  • EHD2 protein, human
  • Microfilament Proteins
  • Phosphatidylinositol Phosphates
  • Vesicular Transport Proteins
  • phosphatidylinositol 3-phosphate
  • phosphatidylinositol 5-phosphate
  • RAB8A protein, human
  • rab GTP-Binding Proteins