Human 4E-T represses translation of bound mRNAs and enhances microRNA-mediated silencing

Nucleic Acids Res. 2014 Mar;42(5):3298-313. doi: 10.1093/nar/gkt1265. Epub 2013 Dec 13.

Abstract

A key player in translation initiation is eIF4E, the mRNA 5' cap-binding protein. 4E-Transporter (4E-T) is a recently characterized eIF4E-binding protein, which regulates specific mRNAs in several developmental model systems. Here, we first investigated the role of its enrichment in P-bodies and eIF4E-binding in translational regulation in mammalian cells. Identification of the conserved C-terminal sequences that target 4E-T to P-bodies was enabled by comparison of vertebrate proteins with homologues in Drosophila (Cup and CG32016) and Caenorhabditis elegans by sequence and cellular distribution. In tether function assays, 4E-T represses bound mRNA translation, in a manner independent of these localization sequences, or of endogenous P-bodies. Quantitative polymerase chain reaction and northern blot analysis verified that bound mRNA remained intact and polyadenylated. Ectopic 4E-T reduces translation globally in a manner dependent on eIF4E binding its consensus Y30X4L site. In contrast, tethered 4E-T continued to repress translation when eIF4E-binding was prevented by mutagenesis of YX4L, and modestly enhanced the decay of bound mRNA, compared with wild-type 4E-T, mediated by increased binding of CNOT1/7 deadenylase subunits. As depleting 4E-T from HeLa cells increased steady-state translation, in part due to relief of microRNA-mediated silencing, this work demonstrates the conserved yet unconventional mechanism of 4E-T silencing of particular subsets of mRNAs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Drosophila Proteins / analysis
  • Drosophila Proteins / chemistry
  • Eukaryotic Initiation Factor-4E / metabolism
  • HeLa Cells
  • Humans
  • MicroRNAs / metabolism*
  • Nucleocytoplasmic Transport Proteins / analysis
  • Nucleocytoplasmic Transport Proteins / chemistry
  • Nucleocytoplasmic Transport Proteins / metabolism*
  • Protein Biosynthesis*
  • RNA Interference*
  • RNA Stability
  • RNA, Messenger / metabolism
  • RNA, Viral / metabolism
  • Repressor Proteins / analysis
  • Repressor Proteins / chemistry

Substances

  • 4E-T protein, Drosophila
  • Drosophila Proteins
  • EIF4ENIF1 protein, human
  • Eukaryotic Initiation Factor-4E
  • MicroRNAs
  • Nucleocytoplasmic Transport Proteins
  • RNA, Messenger
  • RNA, Viral
  • Repressor Proteins