Human mouse mast cell protease 7-like tryptase genes are pseudogenes

J Allergy Clin Immunol. 2001 Feb;107(2):315-21. doi: 10.1067/mai.2001.112130.

Abstract

Background: Alpha-tryptase and beta-tryptase are important clinical markers for mast cell-dependent disorders. A third family of tryptase genes on human chromosome 16 has been identified and called human mouse mast cell protease 7 (hmMCP-7)-like tryptase.

Objective: This study was designed to determine whether these tryptase genes are expressed by human mast cells.

Methods: A 2842-bp hmMCP-7-like tryptase gene was cloned and sequenced from a human placental genomic library. PCR and RT-PCR procedures, respectively, were used to determine whether this tryptase gene family was present in most genomes and whether it was expressed.

Results: The tryptase clone was almost identical to the hmMCP-7-like tryptase II and I genes, and therefore it was called hmMCP-7-like tryptase III. All such genes encode a Gln(-3) like alpha-tryptase. They also terminate translation after amino acid 235, whereas alpha- and beta-tryptase genes each encode a 275-amino acid protein. In this study, cell lines HMC-1, KU812, and Mono-Mac-6; mast cells derived in vitro from cord blood and fetal liver progenitors; and mast cell-enriched preparations of dispersed skin and lung cells contained hmMCP-7-like tryptases in their genomes by PCR with gene-specific primers. To identify whether such genes were transcriptionally active, RT-PCR revealed alpha- or beta-tryptase products in all mast cell preparations and cell lines and in activated skin-derived mast cells, but no hmMCP-7-like tryptase products.

Conclusion: These results indicate hmMCP-7-like tryptase (I, II, III) genes are pseudogenes and unlikely to affect measurements of alpha- and beta-tryptases.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Cloning, Organism
  • Gene Amplification
  • Humans
  • Mice
  • Molecular Sequence Data
  • Pseudogenes / genetics*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Serine Endopeptidases / genetics*
  • Tryptases

Substances

  • Tpsb2 protein, mouse
  • Serine Endopeptidases
  • Tpsab1 protein, mouse
  • Tryptases

Associated data

  • GENBANK/AF098327
  • GENBANK/AF099147