39 kDa core protein [Monkeypox virus]

Run BLAST
Find regions of similarity between this sequence and other sequences using BLAST.
Identify Conserved Domains
View conserved domains detected in this protein sequence using CD-search.
Highlight Sequence Features
Opens the Highlight Feature Bar and highlights feature annotations from the FEATURES table of the record. The Highlight Feature Bar can be used to navigate to and highlight other features and provides links to display the highlighted region separately. Links in the FEATURES table will also highlight the corresponding region of the sequence. More...
Find in this Sequence
Finds sub-sequences or patterns in the sequence and highlights the matching regions. The tool works with standard single letter nucleotide or protein codes including ambiguities and can match Prosite patterns in protein sequences. More...

Human monkeypox and smallpox viruses: genomic comparison. [FEBS Lett. 2001]
Human monkeypox and smallpox viruses: genomic comparison.
Shchelkunov SN, Totmenin AV, Babkin IV, Safronov PF, Ryazankina OI, Petrov NA, Gutorov VV, Uvarova EA, Mikheev MV, Sisler JR, et al. FEBS Lett. 2001 Nov 30; 509(1):66-70.
Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes. [mBio. 2021]
Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes.
Senkevich TG, Yutin N, Wolf YI, Koonin EV, Moss B. mBio. 2021 Aug 31; 12(4):e0149521. Epub 2021 Jul 13.
Classification of human Herpesviridae proteins using Domain-architecture Aware Inference of Orthologs (DAIO). [Virology. 2019]
Classification of human Herpesviridae proteins using Domain-architecture Aware Inference of Orthologs (DAIO).
Zmasek CM, Knipe DM, Pellett PE, Scheuermann RH. Virology. 2019 Mar; 529:29-42. Epub 2019 Jan 6.

RefSeq protein
See the reference protein sequence for A5L protein-like (NP_536542.1).

Nucleotide
Nucleotide sequence from coding region
Taxonomy
Taxonomy sequences associated with protein record
CDD Search Results
Display conserved domains within a protein
Conserved Domains (Concise)
Link to a concise list of conserved domains in a protein
Conserved Domains (Full)
Link to conserved domains within a protein
Domain Relatives
Display proteins with similar conserved domain architecture
Gene
Link to related Genes
Genome
Genome record encoding protein sequence
PubMed (Weighted)
Links to pubmed

Bacterial and Viral Bioinformatics Resource Center [Bacterial and Viral Bioinform...]
Bacterial and Viral Bioinformatics Resource Center

39 kDa core protein [Monkeypox virus]
39 kDa core protein [Monkeypox virus]
gi|1895682379|gb|QNI39782.1|

Protein
Monkeypox virus strain Ikubi, complete genome
Monkeypox virus strain Ikubi, complete genome
gi|661920598|gb|KJ642612.1|

Nucleotide
Monkeypox virus isolate DRC 07-0480, complete genome
Monkeypox virus isolate DRC 07-0480, complete genome
gi|524850876|gb|JX878427.1|

Nucleotide
Monkeypox virus strain Gabon-1988, complete genome
Monkeypox virus strain Gabon-1988, complete genome
gi|661921839|gb|KJ642619.1|

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

Protein