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Submitted SNP(ss) Details: ss3986007711           
Submitter
HandleTOMSK_MENTAL_MOL_GEN
Submitter SNP IDNC_000011.10:g.27658302T>C
RefSNP(rs#)clustering in process
Submitted Batch IDSNPTargetedSeqAffective
Submitted DateJul 14, 2020
Publication Cited[1] NRG1, PIP4K2A, and HTR2C contain possible genetic biomarkers of several clinical subphenotypes of depression and bipolar disorder
First entry to dbSNPJul 14 2020 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTARGETEDSEQAFFECTIVE
Ascertainment Samplesize298
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3986007711|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 GAGCATCACC CTGGACGTGT ACAAG
 Y
 CTGCGTCCTT ATTGTTTTCT TCATT

  Submitted Frequency for ss3986007711 back to top
There is no frequency submission for ss3986007711.


  dbSNP summary of Genotypes for ss3986007711 back to top
No sufficient data to compute Hardy-weinberg probability for ss3986007711.


  Submitted individual genotype for ss3986007711 back to top
There is no individual genotype data for ss3986007711.

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