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Submitted SNP(ss) Details: ss2137544101           
Submitter
HandleTOMSK_MENTAL_MOL_GEN
Submitter SNP IDNC_000003.12:g.119947358A>G
RefSNP(rs#)clustering in process
Submitted Batch IDSNPTargetedSeqAffective
Submitted DateJul 14, 2020
Publication Cited[1] NRG1, PIP4K2A, and HTR2C contain possible genetic biomarkers of several clinical subphenotypes of depression and bipolar disorder
First entry to dbSNPJul 14 2020 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTARGETEDSEQAFFECTIVE
Ascertainment Samplesize298
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2137544101|allelePos=26|len=51|taxid=9606|alleles='A/G'|mol=Genomic
 TGATCTGGAG CTCTCGATTC TGAAA
 R
 GGAAACACAT AAAAATATAT TTTTA

  Submitted Frequency for ss2137544101 back to top
There is no frequency submission for ss2137544101.


  dbSNP summary of Genotypes for ss2137544101 back to top
No sufficient data to compute Hardy-weinberg probability for ss2137544101.


  Submitted individual genotype for ss2137544101 back to top
There is no individual genotype data for ss2137544101.

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