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Submitted SNP(ss) Details: ss16920176           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr22.NT_011523.9_210518
RefSNP(rs#)rs4253778
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402579735.R 528 30

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16920176|allelePos=302|len=502|taxid=9606|alleles='G/C'|mol=Genomic
 TCTCATGCTT TGAGACTGTC CCAGGATGTC TAGTGCCAGC TACCCCAGGC AGGTCATCTG
 GTGTGAATGT TGACTCTTCC TGCACCAAGT CTCAGACCTG CCCCACCCTC CTCCCCACTC
 TGGGTCTCCT gatcttggct cactgcaatc tccgtctccc aggttcaagc gattctccca
 cctcagcctc ccgagtatct gggattacag gcgtgagcca ccgtgcctgg cCTACAAAAC
 CTAGTTCTAA CACAATCACT CCTTAAATAT GGTGGAACAC TTGAAGCTTG ATATCTAGTT
 T
 S
 GATTCAAAAG CTTCATTTCC CATATTATGC AAAACTGGTG GTTGTGATCT CCAGAATGTA
 CTGTTCCTCC TACTAGCTCT AATTTTTCTC CCTGACAGGT GGTCATCAGG TAAATCACAA
 GTGAAAAGGC CGCACCATAA GGTGTACTTA GGGCACTATT GCCGCCTAGT AGTATGAATA
 TTTAGGAAAG AGTACTGGTC

  Submitted Frequency for ss16920176 back to top
There is no frequency submission for ss16920176.


  dbSNP summary of Genotypes for ss16920176 back to top
No sufficient data to compute Hardy-weinberg probability for ss16920176.


  Submitted individual genotype for ss16920176 back to top
There is no individual genotype data for ss16920176.

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