Submitted SNP(ss) Details: ss105107549

Submitted SNP(ss) Details: ss105107549

Submitter
Handle	PHARMGKB_PHAT
Submitter SNP ID	PS205513_PA150532175_101
RefSNP(rs#)	rs4988359
Submitted Batch ID	PA150532176
Submitted Date	Jul 23, 2008
Publication Cited	N.D.
First entry to dbSNP	Jul 23 2008 12:00:00:000AM

Resource Links
Submitted Gene Name	IL18
Submitted Gene ID	3606
Submitted SNP Synonyms	N.D
Source linkout	Source Link

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PA150532176
Ascertainment Samplesize	54
Population	PA150532176

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
For more information about this position, see http://www.pharmgkb.org/views/reports/submissionVariantReport.jsp?subVarRptId=136707850

Fasta sequence (Legend)

 TTTCTATCTT CCAAATATCT GATGATTTGT AAGAGAACAC TTAAACATGG GTATTCATAA
 GCTGAAACTT CTGGC
 R
 TTTATTGAAT GTCAAGATTG TTCATCAGTA TACTAGGTGA TTAACTGACC ACTGAACTTG
 AAGGTAGTAT AAAGT

Submitted Frequency for ss105107549

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
PA150532176 - UNKNOWN	54	A=0.96296299	G=0.03703700				PA150532176	PHARMGKB_PHAT

dbSNP summary of Genotypes for ss105107549

No sufficient data to compute Hardy-weinberg probability for ss105107549.

Submitted individual genotype for ss105107549

There is no individual genotype data for ss105107549.

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