CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS20681.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
20681.1 |
Public |
Mus musculus |
6 |
Pyroxd1 |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 20681.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000041852.7 |
ENSMUSP00000036394.7 |
Accepted |
alive |
|
|
|
NCBI |
NM_183165.3 |
NP_898988.2 |
Updated |
not alive |
|
|
|
NCBI |
NM_183165.4 |
NP_898988.2 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_898988.2 |
498 |
Q3TMV7 |
498 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 20681.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1497 nt): ATGGAGGCCCCGCGACCGGCAGGGACATTCGTGGTGGTAGGAGGTGGCATCGCTGGCGTCACGTGTGCCG AGCAGCTGGCTGTCAGTTTCCCAGAGGAAGACATTCTCCTAGTCACAGCCTCTCCTGTTATCAAAGCCGT TACAAACTTCAGACAGGTTTCTAAAGTACTGGAAGAATTTGATGTTGAAGAACAGCCAGGTACTATGCTG GAAAGTCGCTTTCCCAACATTAAGGTCATCGAATCTGGAGTAAAGCAGTTGAAAAGTGAAGACCATTGCA TCTTCACAGAAGACGGTCGTGAATTTGTATATAAGAAACTCTGTCTGTGTGCTGGAGCTAAGCCAAAGTT AATCTACGAGGGAAATCCACGTGTACTGGGAATCCGTGATACAGACAGTGCTCAGGAATTTCAGAAAGAG CTTGCAAAAGCCAGGAGGATAATGATTGTCGGGAATGGTGGCATTGCTCTGGAGCTAGCGTATGAAATTG AAGGCTGTGAAGTAGTTTGGGCCATAAAGGATAACGCCATTGGGAATACATTCTTTGACGCGGGTGCAGC AGAGTTTCTGACTTCCAAGCTCATGTCTGAAAAATCAGAGGCTAAAATTGCACATAAAAGAACTATATAT ACAGTTGAAGAAGCAAAGAAGGAAACCAGAACCAAATCTAAAGCTGATTATGTGGGCAGTGCCCTTGGAC CAGACTGGCACGGAGGCTTGGCTTTGAAAGGAACTGAAGAGTTTTCTCACAGTGTTCACATTGAAACCAG ATGTGAAGTAAAGAAAATCTACCTTGAAGAGGAATTTAAGATTATGAAGAAAAAGTCCTTGGCTTTTCCA AAGGACCACCATAAGTCAGTTACAGCTGATAAAGAAATGTGGCCTGTGTATGTGGAACTGACCAATGGGA CAATATACGGCTGTGATTTCCTTGTCAGCGCTACAGGAGTCACCCCAAACGTACACCCTTTTCTTCATAG AAACAATTTTGCTCTAGGAGAAGATGGCGGCCTGAGAGTGGATGACCAGATGCGCACGTCACTTCCTGAT ATCTATGCTGCTGGAGACATCTGCACTGCGTGCTGGCAGCCGAGTCCAGTCTGGCAGCAGATGAGGTTGT GGACACAGGCCCGGCAGATGGGGTATTATGCAGCCAAGTGCATGGCCGCAGCTAGCATGGGACATCCTAT TGACATGGATTTCAGCTTTGAACTGTTTGCTCATGTCACAAAGTTTTTTAACTATAAGGTTGTATTGCTG GGAAAATACAACGCACAAGGCCTGGGCGCAGACCATGAGTTGATGCTGAGGTGCACCAGAGGACAAGAGT ATGTCAAAGTCGTTATGCAGAATGGACGCATGATGGGAGCCGTCTTAATTGGTGAAACGGACTTAGAGGA AACATTTGAAAATTTAATCTTAAACCAAATGGACCTTTCATCATACGGGGAGGATCTCCTAGATCCAAAT ATCGACATAGAGGATTATTTTGATTGA
Translation (498 aa): MEAPRPAGTFVVVGGGIAGVTCAEQLAVSFPEEDILLVTASPVIKAVTNFRQVSKVLEEFDVEEQPGTML ESRFPNIKVIESGVKQLKSEDHCIFTEDGREFVYKKLCLCAGAKPKLIYEGNPRVLGIRDTDSAQEFQKE LAKARRIMIVGNGGIALELAYEIEGCEVVWAIKDNAIGNTFFDAGAAEFLTSKLMSEKSEAKIAHKRTIY TVEEAKKETRTKSKADYVGSALGPDWHGGLALKGTEEFSHSVHIETRCEVKKIYLEEEFKIMKKKSLAFP KDHHKSVTADKEMWPVYVELTNGTIYGCDFLVSATGVTPNVHPFLHRNNFALGEDGGLRVDDQMRTSLPD IYAAGDICTACWQPSPVWQQMRLWTQARQMGYYAAKCMAAASMGHPIDMDFSFELFAHVTKFFNYKVVLL GKYNAQGLGADHELMLRCTRGQEYVKVVMQNGRMMGAVLIGETDLEETFENLILNQMDLSSYGEDLLDPN IDIEDYFD
|