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Report for CCDS89691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89691.1 Public Mus musculus 3 1110002E22Rik 23 108 98 CCDS HistoryNCBI Gene:102634333Re-query CCDS DB by CCDS ID:89691.1Re-query CCDS DB by GeneID:102634333See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163080.2 ENSMUSP00000123851.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163080.2Link to Ensembl Protein Viewer:ENSMUSP00000123851.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000163080Re-query CCDS DB by Protein ID:ENSMUSP00000123851
Original member NCBI NM_001370862.1 NP_001357791.1 Updated not alive Link to Nucleotide Sequence:NM_001370862.1Link to Protein Sequence:NP_001357791.1Re-query CCDS DB by Nucleotide ID:NM_001370862Re-query CCDS DB by Protein ID:NP_001357791
Current member NCBI NM_001370862.2 NP_001357791.1 Accepted alive Link to Nucleotide Sequence:NM_001370862.2Link to Protein Sequence:NP_001357791.1Re-query CCDS DB by Nucleotide ID:NM_001370862Re-query CCDS DB by Protein ID:NP_001357791Link to BLAST:NP_001357791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357791.1 1786 E0CYV9 1786 100% 0 0

Chromosomal Locations for CCDS 89691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138065052 138070412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5361 nt):
ATGCTTTCCGTTCATTTCTGGCAGACCCCTGTCCGACCTACAGATGCTGCTTCGTCGCTGGCTAATGGCA
TTCAGACCCCCACCCACCGACGCTGTCAGACAAGCAACTGGACTGGACAGCTCAGCAGCAGGACACTGGC
CACAATCGCGGCCAGAGCCGCAGCCCCCTGGCTACAGACCACCTCTGCTGCCTCTTTTGGGAGCCCTCCC
ACCTCCCTCTGGCTTGCCGAGGCCCCACCACAGGGGCTGAAGAACTGGGCGGTGGTGGCAACTGTGGCAG
TGGTACCTACAGCCTTGGGGCCAGCCCAAGCACGTGGGAACCTGTTTCAGGCCACTCTGTGGCCCCTCCG
GGACCAGAGGGGGACCCAGGACAGCCCCAGCGCTCACCACTGCCTCATCTTGTCTCTGAAACCTGGACAA
GGGCTCAGAATGGAAGGCGGTACGTCTGACATGAACTCACAGACCAGCCTGACGCCTGCGGAGGACCCGG
TGAGCCGACCACAAGACAGCCCGGAGCCCAGGCAGCAGCTGCGGCCACTACCTGAGCCGTCAGCCTCTAC
CCTGCCTGAAGCCAAGTATGTGGAGACGTGTGCTTCAGCTGGACTCCGAAGGGAGAGTCCCCAGACCCTG
AAACTGCCACCAGAACAGCAGGCCTCCAGGAGTCCAAAGACAAAAGCCCAGGATGAACCCAGCGGCCATG
CCCCTGAGGCTCCAGCTCCGGGGGAGAGTCCTGCTTCCTCCCAGTGCCTCCCCTCCCAGGCTTGTGAGAA
CGACTTCTCGTCTTCCTCCTCCTCCTCCTCCTCCCTGGTGGACAGTGCAGAAGACAATGGCCTTTCCAAA
ATGGACGATCCCACCAAGTTACTGGGGGTCCTGGCCACCTCCTCTTCATCCTTAGGCTTTGAGAGTGATC
CCGAAACGAGCTGCCGACAACACAGAGAAGAAGCAGGAGACCGGGCAGGAGCGGGGGAGGACAAAAGAGG
AGGGGTCGATGATGGAATAGCGTCCTGCAAGGACATTATTGCTAAGTCCCACAGCAAGAGGGGTCCCCTG
AGAAACGAGGATGCACACTACATCACCACCCATGAGATCCAGCTGACTGAGGTAGAGCAGGGTATGGATT
TCGACGTGGGGCTGGCTTCTCGCTGGGACTTCGAGGACAACAACGTGATCTATTCATTCGTGGACTACGC
TTCCTTTGGTGGCAGTGATGAGACCCCAGGAGACATCACCACAGAAGAAGATGATGACAATAGCTGTTAC
GTCAGCACCACACCAAGCACCAACACCACTCGGACTCCCAGCCCCATCAGCAGCGACCTGGCTCGACCGG
GGGCAGGCAGCAGCGGCCGTGACACCAGCAGCACGGAAGTGGGCAGTGGCCCCTCTGACAGTGACACTGT
CCCTCCACCCACTGGACCTGGCACTGCCACTCCACCTGAGCCTTTGCTGGAGCTCCGGGAGGCAGCCTTA
GGGGCATCGGCCACTGCTGCAAGCAGCTGTGGGAGTGCAGCAAGCCAGATCCTCCTGTCAATCAAGCCAA
CTTCCCGGGCTATAAATGAGCCTAGCAACGTGCGTGCAAAGCAAAACATTATTTATGCTGCCAAGCATGA
AGGCGACATGAGCCTCCGAGTCTCTTCAGCTGCTGAACACAATTCAAGTTCACTGAAGCAAAATTCGGCT
GCAGCCGTGGCTCAGGACCATGCAAAGAAATTCATTGCTGTCCCTGCTCGCCTGCAAACCAGGTGCGGGG
CCATCCGGGCAAAGGAGCTGGTGGACTACGCCAGTGGCGCCTCCAGTGCAGTGAGCGAGCTGGACGATGC
GGACAAAGAGGTGAGGAACCTAACCTCCAGGGCCTTCCGGAGCCTTGCTTACCCTTATTTTGAGGCTCTG
AACATCAGCTCCCGGGAATCCTCTACCACGCTCTCTGAAGTGGGCTTTGGACGATGGTCAACCTTCCTGG
ACTTAAAATGTGGAGGTGTTGGAGCCAGAGTGGAGCAGAGCCTGCTGAGGAGCAGCGCAGCCTCTGTGGC
TGCAGGTCTGAGGAAGGGTGGTGGCACCCGAGCCACTGCAGACCAGCTCTACCTCCAGACCAAGAAGTCG
CAGACCAAGGCCTTGGAGTTTGTGGTCAGCAAAGTTGAGGGGGAAATCAAACATGTGGAGACACCCCTGT
GCTTCCAGAAGCAGGTCCAAACTGGCTCTCGGGTGGTCACACTCCTGGAGCCGCTCAATCTCCGCAGTGA
GAGCAAAGCCAGCTCAGCCACTGGGCCCTGCAGAATCACCAAAGGTTCTAGCAAGGGTCCAGGCTCTGTG
TACACAGATGACGGCTCAGAGACATCTGAGAGTAGCAAGCCTGCCTCCCGTAGTGATGGCCCCCAGAAGA
AGTCCAAATTCGCTTCCAGCCTGCTCAAAAACGTCATCTCTAAGAAGATGCAGAGAGAGCATGAGTTTAA
GATGGAGAGAGGAGAAGTCACTGATACATCTCACCGTAACCCCCCCAGCACGAAGGAGACAGAGGGACCT
CCTGGGGCCGAGAAGCCGTGGGAGCGGGGTCTGCAGAGGCAGAGTTCACGACACTCCGAGGCTAGCTCTG
AGTACACCGTGGTCAGTGTGTCTGATGCAGGTGGAGAAGGGTCTGTTGTAGGTTCTAAATCCCCCATTTT
CAAAGCCAGTACTCCTCGAGAGAGCCACACGGGTTCCGGCCAAAATGTCTCCGATGGACACACAGAAGTA
TGTGAAATTAAAAAGAGTGCTTCAGAGACGGTGAAGGGCATCTTCCTTCGGAGTCAGAACAGCGCCTTCC
GGACGTGGAAGGAGAAGGAGGCAGAGAAACTGGAGGAGAAAGCTCCCGTTGGGAGGCTGAAGCTCCGCAA
AGGTGGGGACTGGAGGGCTGATCTTGGGGAGATCTCTGCCAGCAAGTCTACCATCATGTCTCGCCTCTTT
GTTCCCAACATCCAGCAGACACCCAAGGACAAACAGCCAGAGAAGCAGGCCACCAAGTACCCTGCCGCTG
CTGCACAGGCTACCTCGGTGGCTGTGATCAGACCCAAGGCTCCGGAAATCAAGATCCGGCTGGGAAGTGT
ACAGCAGCCAAGCTCAGACTTCAACATTGCCAAGTTGCTCACGCCCAAGCTGGCCAGCGGCAGCAGCTCA
AAGCTCTTCAAGACCATTGAGGATAACAGCAGAACCCAGCAGAAACTCTTCCGTGGTGGCGACAATCTGG
AAAAAGTACCCCAGTTCCAGGTGAGGGATGTTCGAGACAAGTCCAAGGCCTCGGGACCTCTCCACCAGGT
GAGGGACGTGAGGAAGCTAATCAAAGGGTCAGGCGATAGCAGTGACAAGGGCAGTGTCACCCCAGAGCAG
GGCTTGACAGGGCCTAAGCCTAGGCAGCTGACTCCTGCCTCGGGAGGATCTAGGTCCTTGTCCCCTATGG
TGATTATGTGCCAGGCGGTTGCGAATCCGAGAGAAGAAGGTGTGGATCGAGAGCCCAGGGAAGGTGTGAG
CCAAGTGAGCAATGGCGGTAGACTCTTGAACTCCTCCCCAGAAGGGACTGTCTTGGTTCACAGGGCATCT
GGCAGGCTGCCTGTGGCCACCATTGCTCCCAATAAATCTGAGCAAGGCTCTTACCTTCCTGTGCTCAAGA
TTGTCTCCAAAGCGTCTGCTCAGAGGACCCCTGAGAAGCCCAAAGAGGAAGAGGCCAAGGAGGAGGGCAA
AGCCCCAAAGCCAGCCCGGAATGCCCTGGAGAAGCTGACGGCTGCCGTGAGATCCATGGAAGAGCTCTAC
AGCTTCAACAGGAATGAATGGAAGCGCAAAAGTGACCCCTTGCCCATGATGGCTGACAGCCATGTCCTGT
CACTCATAGCCAGTGAGGAGAAGGAAGGGGTAGCTGGACCCGAAGGAGGAGACCCTGACAAGCTGGCCAA
GCAGCTGGGACAGGTGGAGGAAAGGGACACGGGACACAAAGGTGGCGTGGTCCTGAGAGCAGCCCCCATA
GAACGTCTGCAGAGGAGAAACTCAAACCCCAGCACGGAGAGCGTGTCTGCCCGGGCGGCTGCCTTTGAGA
ACATGGCCAGAGAAAGGCCCCGGTCACTCTATATTCCTCCAGTCCACAAAGATGTGGAAAGAACACAACC
TTTGCAGCCCCTACCCCCACTCCCCGGCAATCGGAACGTGTTCACGGTGAGTTCTAGCAGCACTCAAAAA
ACTGGAGGTGTTGCTGGCAAGTTCCCACAAGGGCCTTCTCCCGAGGGCCTTTCAACAGCCAAGGGCATCA
AAGCGCAGGGACTCAGATCCCTCAAGATCTCCCCAGCCACCCGAGCCCCTCCTGAGGATGCCTCCAACAG
GAAAACTGCTGTCAGTTTGGAGAAGAGCAACAGTGACTGTGAGAATTACCTGACTATCCCCCTTAAAGGA
AGTGCTGCTTCAGCAGAGTTGCTTGGCAGACCTGGGGCTTCCAGAGATGGGCCCCCCAGCTCCTCAGCTG
CCACTCTCTGTAGTTTACCTCCACTGAGTGCCCGCAGCCAGGTCCCCAGTAACCCCAAAGGATCTCAGGT
CAGTGGAACCAGCAGACCAGCTTGGCGTACCAAACCTGACAACCACCGAGAAACAGTCGTTGCTGCCCCG
ACAGGGCCACAGAGCCCTGAGCACACTCCCACTGCTGTCTACCACCAGCAGGCATTGCCTTTTACCCTTC
AGGGTGCCCAGCCTCAGGTCCTCTGCTTCTCCCCGCCTGGTATGCCAGCCCCAGCCCCTGCAGGCCCAGC
TGCTGTCCCCACAGACCCCTTCCAGCAGCCACAGCCTCAGCAGACACAGCGCAAGATGCTCCTGGATGTG
ACCACCGGCCAGTATTATCTGGTGGACACGCCAGTTCAACCCATGACCCGGAGATTGTTTGACCCCGAGA
CAGGGCAATACGTGGATGTGCCCATGACTTCTCAACAACAGCCTGTGGCACCCATGTCCCTCCCTGTACC
TCCTCTGGCCCTGAGTCCTGGGGCCTATGGGCCCACCTACATGATCTATCCTGGATTTCTGCCCACAGTG
CTGCCCCCCAACGCCCTGCAGCCCACGCCCATGGCTCACACTCCAGGAGGCAGTGAGCTCTCTGTGGCTA
CAGAGCCCCCCAGCAAAGAGACAGCTGCAGCGTTCACTGAAGCCCCGTACTTCATGGCCTCTAGTCAGTC
CCCTGCCTCCTCTTCCTCCTCAGCCCCGGCAGCCACACCCCAGCTCGTGGGGGCCAAGGGCTTTGCCCAG
TTGCACGGCAAGCCTGTCATCAGCATCACCTCACAGCCCTTGGGGCCACGGATCATTGCTCCCCCTTCCT
TCGATGGCACCACCATGAGTTTCGTGGTGGAACACAGATGA

Translation (1786 aa):
MLSVHFWQTPVRPTDAASSLANGIQTPTHRRCQTSNWTGQLSSRTLATIAARAAAPWLQTTSAASFGSPP
TSLWLAEAPPQGLKNWAVVATVAVVPTALGPAQARGNLFQATLWPLRDQRGTQDSPSAHHCLILSLKPGQ
GLRMEGGTSDMNSQTSLTPAEDPVSRPQDSPEPRQQLRPLPEPSASTLPEAKYVETCASAGLRRESPQTL
KLPPEQQASRSPKTKAQDEPSGHAPEAPAPGESPASSQCLPSQACENDFSSSSSSSSSLVDSAEDNGLSK
MDDPTKLLGVLATSSSSLGFESDPETSCRQHREEAGDRAGAGEDKRGGVDDGIASCKDIIAKSHSKRGPL
RNEDAHYITTHEIQLTEVEQGMDFDVGLASRWDFEDNNVIYSFVDYASFGGSDETPGDITTEEDDDNSCY
VSTTPSTNTTRTPSPISSDLARPGAGSSGRDTSSTEVGSGPSDSDTVPPPTGPGTATPPEPLLELREAAL
GASATAASSCGSAASQILLSIKPTSRAINEPSNVRAKQNIIYAAKHEGDMSLRVSSAAEHNSSSLKQNSA
AAVAQDHAKKFIAVPARLQTRCGAIRAKELVDYASGASSAVSELDDADKEVRNLTSRAFRSLAYPYFEAL
NISSRESSTTLSEVGFGRWSTFLDLKCGGVGARVEQSLLRSSAASVAAGLRKGGGTRATADQLYLQTKKS
QTKALEFVVSKVEGEIKHVETPLCFQKQVQTGSRVVTLLEPLNLRSESKASSATGPCRITKGSSKGPGSV
YTDDGSETSESSKPASRSDGPQKKSKFASSLLKNVISKKMQREHEFKMERGEVTDTSHRNPPSTKETEGP
PGAEKPWERGLQRQSSRHSEASSEYTVVSVSDAGGEGSVVGSKSPIFKASTPRESHTGSGQNVSDGHTEV
CEIKKSASETVKGIFLRSQNSAFRTWKEKEAEKLEEKAPVGRLKLRKGGDWRADLGEISASKSTIMSRLF
VPNIQQTPKDKQPEKQATKYPAAAAQATSVAVIRPKAPEIKIRLGSVQQPSSDFNIAKLLTPKLASGSSS
KLFKTIEDNSRTQQKLFRGGDNLEKVPQFQVRDVRDKSKASGPLHQVRDVRKLIKGSGDSSDKGSVTPEQ
GLTGPKPRQLTPASGGSRSLSPMVIMCQAVANPREEGVDREPREGVSQVSNGGRLLNSSPEGTVLVHRAS
GRLPVATIAPNKSEQGSYLPVLKIVSKASAQRTPEKPKEEEAKEEGKAPKPARNALEKLTAAVRSMEELY
SFNRNEWKRKSDPLPMMADSHVLSLIASEEKEGVAGPEGGDPDKLAKQLGQVEERDTGHKGGVVLRAAPI
ERLQRRNSNPSTESVSARAAAFENMARERPRSLYIPPVHKDVERTQPLQPLPPLPGNRNVFTVSSSSTQK
TGGVAGKFPQGPSPEGLSTAKGIKAQGLRSLKISPATRAPPEDASNRKTAVSLEKSNSDCENYLTIPLKG
SAASAELLGRPGASRDGPPSSSAATLCSLPPLSARSQVPSNPKGSQVSGTSRPAWRTKPDNHRETVVAAP
TGPQSPEHTPTAVYHQQALPFTLQGAQPQVLCFSPPGMPAPAPAGPAAVPTDPFQQPQPQQTQRKMLLDV
TTGQYYLVDTPVQPMTRRLFDPETGQYVDVPMTSQQQPVAPMSLPVPPLALSPGAYGPTYMIYPGFLPTV
LPPNALQPTPMAHTPGGSELSVATEPPSKETAAAFTEAPYFMASSQSPASSSSSAPAATPQLVGAKGFAQ
LHGKPVISITSQPLGPRIIAPPSFDGTTMSFVVEHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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