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Report for CCDS85430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85430.1 Public Mus musculus 7 Inpp5f 23 108 98 CCDS HistoryNCBI Gene:101490Re-query CCDS DB by CCDS ID:85430.1Re-query CCDS DB by GeneID:101490See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85430.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118605.1 ENSMUSP00000113700.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118605.1Link to Ensembl Protein Viewer:ENSMUSP00000113700.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118605Re-query CCDS DB by Protein ID:ENSMUSP00000113700
Original member Current member NCBI NM_001346517.1 NP_001333446.1 Accepted alive Link to Nucleotide Sequence:NM_001346517.1Link to Protein Sequence:NP_001333446.1Re-query CCDS DB by Nucleotide ID:NM_001346517Re-query CCDS DB by Protein ID:NP_001333446Link to BLAST:NP_001333446.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333446.1 505 Q8CDA1-2 505 100% 0 0

Chromosomal Locations for CCDS 85430.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128689242 128689246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128690627 128690698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128691752 128691825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128692254 128692382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128693645 128693732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128694176 128695325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1518 nt):
ATGCACCTCACTGACGCTGCGCACAGAGATGTGGAAGTGCTGCTGCTGCTGTCTAACGCTGCCTACTATG
TGGCCTATTATGATGACGAAGTTGATAAAGTAAACCAGTATCAACGACTGGGCCTAGAAGACCTGGAAAG
AATAGAAATAGGTCCTGAACCTACTCTTTTCGGCAAACCCAAGTTCTCGTGCATGCGGCTGCACTACAGG
TGTAAAGAAGCAGGCGGTTACTTCCATACGCTAAGAGCTGTGCCACGTAGTCCTGAAGAAGATGGCAAAG
ACACTCTTCAGTGCATCGCAGAGATGCTGCAGATCACCAAGCAAGCCATGGGACTGGACGTTCCTATCAT
TGAGAAGAAACTTGAGAGGAAAAGCAGTAAGCCTCATGAAGACATCATTGGTATCAGATCTCAAAACCAA
GGCTCTCTTGCCCAGGGGAAAAGCTTTTTAATGAGCAAATTTTCATCTCTAAATCAAAAAGTAAAGCAGA
CCAAATCCAATGTGAACATCGGCAACCTACGAAAATTAGGAAACTTTACAAAGCCTGAAATGAAAGTTAA
CTTTCTAAAACCAAACTTAAAAGTCAATCTTTGGAAGTCAGATAGTAGTCTTGAGACCATGGAAAACCCA
GGAGTGATGGGTAATAAGGTCCAGGGGGAGTCTGATGGGGACATTTCTTCAGATAACGACTCGTACCACT
CTGATGAATTCCTTACAAATTCTAAGTCGGAGGAAGACAAGCAGCTAGCCAATTCTTTAGAGAGCGTAGG
GCCAATAGATTACATTCTCCCAAGCTGTGGGATTATTGTGTCAGCACCTCGATTAGGCAGTCGGTCTCAG
TCTGCCAGCAGTATCGACGTCAGCACTCATGCCCCCTCAGAAGCTGCTGCTGGTCCTGGAAGTGAACTTG
GGAAAGGCCTGGAGTCTCCCCTGAAGAAAAGCCCTTCTGCTGACAGCATACACACACGGACTGGCTTCAC
AAAGCCCATGGATGTTTACTGCCAGAGATTTGTGCAGGATGCACAGAACAAAATGAATGACCTGTCAGAG
ATCAGGTCTGTAGCTCAGAAGAGTGAGGAGGGAAGTCACAAGACTAACCGTGTGTCTAATGAAGAAACCC
AGTCAGAACCAATGGGACAGACGCCTCCTCGACCCTCTCAGTTAAACGTCTCTTGTTCTGTGGCAGGCCC
ACCATTCTTATCAGTTGAACCAGTACATTCAGTGCTATCTCAGAAGACGCCCAGCTCCGGGTCCAGCCTT
CTGGAACTTGAGGCAGGGCTCTGCGTAACTCCCTCTTCAGAGAGCAGCAGCAGCAGGGCAGTCTCTCCCT
TTGCAAAGATCCGCAGCTCCATGGTCCAAGTCGCTAATATTACCCAAGCTGGGCTAACTCATGGGATAAA
CTTGGCGGTTGCCAAAGTTCAGAAGAGTCCAGCAGAACCCGAAGCGGTTAACGAAATTCAACAAAATGAA
CTTAAAAATATGTTTACACAATGCCAGACACGAATAATTCAGATTTAG

Translation (505 aa):
MHLTDAAHRDVEVLLLLSNAAYYVAYYDDEVDKVNQYQRLGLEDLERIEIGPEPTLFGKPKFSCMRLHYR
CKEAGGYFHTLRAVPRSPEEDGKDTLQCIAEMLQITKQAMGLDVPIIEKKLERKSSKPHEDIIGIRSQNQ
GSLAQGKSFLMSKFSSLNQKVKQTKSNVNIGNLRKLGNFTKPEMKVNFLKPNLKVNLWKSDSSLETMENP
GVMGNKVQGESDGDISSDNDSYHSDEFLTNSKSEEDKQLANSLESVGPIDYILPSCGIIVSAPRLGSRSQ
SASSIDVSTHAPSEAAAGPGSELGKGLESPLKKSPSADSIHTRTGFTKPMDVYCQRFVQDAQNKMNDLSE
IRSVAQKSEEGSHKTNRVSNEETQSEPMGQTPPRPSQLNVSCSVAGPPFLSVEPVHSVLSQKTPSSGSSL
LELEAGLCVTPSSESSSSRAVSPFAKIRSSMVQVANITQAGLTHGINLAVAKVQKSPAEPEAVNEIQQNE
LKNMFTQCQTRIIQI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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