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Report for CCDS85223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85223.1 Public Mus musculus 7 Eml2 23 108 98 CCDS HistoryNCBI Gene:72205Re-query CCDS DB by CCDS ID:85223.1Re-query CCDS DB by GeneID:72205See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85223.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000117338.7 ENSMUSP00000112491.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117338.7Link to Ensembl Protein Viewer:ENSMUSP00000112491.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117338Re-query CCDS DB by Protein ID:ENSMUSP00000112491
Original member NCBI NM_001347582.1 NP_001334511.1 Updated not alive Link to Nucleotide Sequence:NM_001347582.1Link to Protein Sequence:NP_001334511.1Re-query CCDS DB by Nucleotide ID:NM_001347582Re-query CCDS DB by Protein ID:NP_001334511
Current member NCBI NM_001347582.2 NP_001334511.1 Accepted alive Link to Nucleotide Sequence:NM_001347582.2Link to Protein Sequence:NP_001334511.1Re-query CCDS DB by Nucleotide ID:NM_001347582Re-query CCDS DB by Protein ID:NP_001334511Link to BLAST:NP_001334511.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334511.1 841 Q7TNG5-3 841 100% 0 0

Chromosomal Locations for CCDS 85223.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19176614 19176761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19179227 19179445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19179526 19179649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19179751 19179855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19181709 19181737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19182270 19182399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19184806 19184955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19186102 19186171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19186261 19186371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19190718 19190813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19191584 19191718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19194009 19194108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19196197 19196351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19196493 19196618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19200500 19200631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19201124 19201191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19201565 19201653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19201830 19201927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19202509 19202596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19202977 19203072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19203902 19204032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19206086 19206211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2526 nt):
ATGGCAACGGGAGGCAGGGCCTGGGGGGGGGACCGGGCCCGAGCTGGGGCTGCGGGGGCCGGCGGTGGCT
GTGGTGGGGCAATGGCGGAGCGCGGCCCGGCCTTCTGCGGCCTCTACGACACGTCCTCTCTGCTGCAATA
CTGCAACGATGATAATCTGTCCGGCACCAGTGGCATGGAGGTGGACGACCGCGTGTCGGCGCTGGAGCAG
CGGCTGCAGCTGCAAGAAGATGAACTGGCGGTCCTAAAGGCGGCGCTGGCGGACGCGCTGCGTCGCCTGC
GGGCATGCGAAGAGCAAGGCGCGGCGCTGCGTGCGAGGAGCACCCCTAAGGGCCGGGCGCCCCCGCGTCT
GGGCACCACCGCCTCGGTGTGTCAGCTCCTGAAAGGCCTTCCCACCAGGACGCCCCTCAATGGCTCCGGA
CCCCCGCGACGCGTGGGCGGCTATGCCACCTCCCCATCTTCCCCCAAGAAAGAGGCGAGCTCTGGCCGTA
GCAGCCGTCGCTACTTATCACCTGAGCGCCTGGCCTCTGTGCGTCGCGAGGACCCCCGTAGCCGTACCAC
ATCTTCCAGTAGTAATTGTAGCGCCAAAAAAGAAGGGAAAACCAAAGAAGTTATCTTCAGCATGGAGGAG
GGATCCGTAAAGATGTTTCTGCGGGGACGCCCTGTGCCCATGCTGATCCCGGACGAACTGGCGCCCACCT
ATAGCCTGGACACTCGTTCTGAGCTGCCCTCCAGCCGGCTAAAGCTAGACTGGGTCTATGGCTATCGAGG
CCGGGACTGCAGGGCCAACCTTTACCTCCTGCCCACTGGGGAGGTGGTGTACTTTGTGGCCTCTGTGGCC
GTACTGTACAGCGTGGAGGAGCAGAGACAACGACACTACCTGGGGCACAACGATGACATCAAATGTCTGG
CTGTCCATCCAGATATGGTCACCATCGCCACAGGACAGGTGGCAGGCACCACAAAGGAAGGCAAGCCTCT
GCCACCCCATGTGCGTGTGTGGGACTCGGTTTCCCTTTCCACCTTACACGTCCTGGGCCTGGGGGTGTTT
GACAGAGCTGTGTGCTGTGTGGCCTTCTCCAAATCCAATGGGGGCAACCTGCTATGTGCAGTGGACGAAT
CCAACGACCATGTGCTCTCTGTGTGGGACTGGGCCAAGGAGAGCAAAGTGGTGGATAGCAAGTGCTCTAA
CGAGGCAGTGCTAGTGGCCACCTTCCACCCCACTGATCCCAGCCTGCTGATAACCTGTGGCAAATCCCAC
ATCTACTTCTGGAGCCTGGAGGGAGGCAGTCTGAGCAAGAGGCAGGGCCTGTTCGAGAAACACGAGAAAC
CAAAGTACGTGCTGTGTGTGACCTTCCTGGAAGGTGGCGATGTGGTCACTGGAGACTCTGGGGGGAACCT
CTATGTCTGGGGCAAAGGTGGAAACCGCATCACCCAGGAAGTTCAAGGAGCCCATGATGGTGGCGTGTTT
GCTCTCTGCGCCCTGCGGGACGGGACGCTGGTGTCTGGAGGGGGCCGCGATCGTAGGGTGGTCCTCTGGG
GTTCGGACTACAGCAAGGTGCAGGAGGTGGAGGTCCCAGAGGACTTCGGCCCTGTACGCACCGTGGCAGA
GGGCCGGGGAGACACACTGTACGTGGGGACCACCCGTAACTCCATCTTGCTAGGCTCGGTGCACACAGGG
TTTTCGCTGCTTGTCCAGGGACATGTGGAGGAGCTGTGGGGCCTGGCCACACATCCTAGCAGGGCACAGT
TTGTGACCTGTGGGCAGGACAAGCTGGTGCATCTGTGGAGTTCCGAGACCCACCAGCCAGTGTGGAGCAG
GAGCATCGAGGACCCTGCCCGTTCGGCTGGCTTCCACCCCAGTGGCTCCGTCCTAGCGGTGGGCACAGTG
ACCGGCAGGTGGCTGCTACTGGACACAGAGACCCATGACCTGGTGGCTATCCACACAGATGGCAATGAGC
AGATCTCCGTGGTCAGCTTTTCACCAGACGGGGCGTACCTGGCTGTGGGCTCCCACGACAACTTGGTGTA
CGTGTACACGGTGGACCAGGGTGGCCGCAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTT
ATCACCCACCTGGATTGGGCCCAGGACAGCACCTGCTTTGTCACCAACTCTGGAGACTACGAGATTCTGT
ACTGGGACCCCGTCACCTGTAAGCAAATCACCAGTGCAGACACCGTGAGAAACGTGGAATGGGCTACCGC
CACTTGTGTGTTGGGTTTTGGAGTGTTTGGGATTTGGCCCGAGGGAGCAGATGGCACAGACATCAATGCT
GTGGCCCGCTCTCATGATGGGAAGTTGCTGGTTTCTGCTGACGACTTTGGCAAAGTGCACCTGTTCAGCT
ACCCCTGCTGTCAGCCGAGAGCCCTCAGCCACAAATACGGTGGACACAGCAGCCATGTGACTAATGTGGC
CTTCTTGTGGGATGACAGCATGGCCCTAACCACTGGGGGCAAAGACACGAGCGTGCTGCAGTGGCGGGTG
GCCTGA

Translation (841 aa):
MATGGRAWGGDRARAGAAGAGGGCGGAMAERGPAFCGLYDTSSLLQYCNDDNLSGTSGMEVDDRVSALEQ
RLQLQEDELAVLKAALADALRRLRACEEQGAALRARSTPKGRAPPRLGTTASVCQLLKGLPTRTPLNGSG
PPRRVGGYATSPSSPKKEASSGRSSRRYLSPERLASVRREDPRSRTTSSSSNCSAKKEGKTKEVIFSMEE
GSVKMFLRGRPVPMLIPDELAPTYSLDTRSELPSSRLKLDWVYGYRGRDCRANLYLLPTGEVVYFVASVA
VLYSVEEQRQRHYLGHNDDIKCLAVHPDMVTIATGQVAGTTKEGKPLPPHVRVWDSVSLSTLHVLGLGVF
DRAVCCVAFSKSNGGNLLCAVDESNDHVLSVWDWAKESKVVDSKCSNEAVLVATFHPTDPSLLITCGKSH
IYFWSLEGGSLSKRQGLFEKHEKPKYVLCVTFLEGGDVVTGDSGGNLYVWGKGGNRITQEVQGAHDGGVF
ALCALRDGTLVSGGGRDRRVVLWGSDYSKVQEVEVPEDFGPVRTVAEGRGDTLYVGTTRNSILLGSVHTG
FSLLVQGHVEELWGLATHPSRAQFVTCGQDKLVHLWSSETHQPVWSRSIEDPARSAGFHPSGSVLAVGTV
TGRWLLLDTETHDLVAIHTDGNEQISVVSFSPDGAYLAVGSHDNLVYVYTVDQGGRKVSRLGKCSGHSSF
ITHLDWAQDSTCFVTNSGDYEILYWDPVTCKQITSADTVRNVEWATATCVLGFGVFGIWPEGADGTDINA
VARSHDGKLLVSADDFGKVHLFSYPCCQPRALSHKYGGHSSHVTNVAFLWDDSMALTTGGKDTSVLQWRV
A


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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