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Report for CCDS83706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83706.1 Public Mus musculus 10 Egr2 23 108 98 CCDS HistoryNCBI Gene:13654Re-query CCDS DB by CCDS ID:83706.1Re-query CCDS DB by GeneID:13654See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83706.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105438.8 ENSMUSP00000101078.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105438.8Link to Ensembl Protein Viewer:ENSMUSP00000101078.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105438Re-query CCDS DB by Protein ID:ENSMUSP00000101078
Original member Current member NCBI NM_001347458.1 NP_001334387.1 Accepted alive Link to Nucleotide Sequence:NM_001347458.1Link to Protein Sequence:NP_001334387.1Re-query CCDS DB by Nucleotide ID:NM_001347458Re-query CCDS DB by Protein ID:NP_001334387Link to BLAST:NP_001334387.1
Current member NCBI NM_001373985.1 NP_001360914.1 Accepted alive Link to Nucleotide Sequence:NM_001373985.1Link to Protein Sequence:NP_001360914.1Re-query CCDS DB by Nucleotide ID:NM_001373985Re-query CCDS DB by Protein ID:NP_001360914Link to BLAST:NP_001360914.1
Current member NCBI NM_001373986.1 NP_001360915.1 Accepted alive Link to Nucleotide Sequence:NM_001373986.1Link to Protein Sequence:NP_001360915.1Re-query CCDS DB by Nucleotide ID:NM_001373986Re-query CCDS DB by Protein ID:NP_001360915Link to BLAST:NP_001360915.1
Current member NCBI NM_001373987.1 NP_001360916.1 Accepted alive Link to Nucleotide Sequence:NM_001373987.1Link to Protein Sequence:NP_001360916.1Re-query CCDS DB by Nucleotide ID:NM_001373987Re-query CCDS DB by Protein ID:NP_001360916Link to BLAST:NP_001360916.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334387.1 420 P08152-2 420 100% 0 0
NP_001360914.1 420 P08152-2 420 100% 0 0
NP_001360915.1 420 P08152-2 420 100% 0 0
NP_001360916.1 420 P08152-2 420 100% 0 0

Chromosomal Locations for CCDS 83706.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 67538371 67538389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 67539745 67540988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGAACGGAGTGGCGGGAGATGGCATGATCAACATTGACATGACTGGAGAGAAGAGACCCCTGGATCTCC
CGTATCCGAGTAGCTTCGCTCCCATCTCTGCACCTAGAAACCAGACCTTCACTTACATGGGCAAATTCTC
CATTGACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAATATTGTGAGTGCGGGCATC
TTGCAAGGGGTCACCCCTCCAGCTTCAACCACAGCCTCCTCCAGCGTCACCTCCGCCTCCCCCAACCCAC
TGGCCACGGGACCCCTGGGTGTGTGTACCATGTCCCAGACTCAGCCTGAACTGGACCACCTCTACTCTCC
GCCACCACCTCCTCCTCCTTATTCGGGCTGTACAGGAGATCTCTACCAGGATCCTTCAGCATTCTTATCG
CCGCCATCCACCACTTCCACCTCCTCTCTGGCCTACCAGCCACCTCCTTCCTACCCATCCCCCAAGCCAG
CTATGGACCCAGGTCTCATTCCTATGATCCCAGACTATCCTGGATTTTTTCCATCTCCGTGCCAGAGAGA
TCCACACGGTGCTGCTGGCCCAGATCGAAAGCCGTTTCCCTGTCCTCTGGACTCCCTGCGAGTGCCCCCT
CCACTCACGCCACTCTCTACCATCCGTAATTTTACTCTGGGGGGTCCCGGTGCTGGAGTCACGGGACCAG
GAGCAAGTGGAGGTGGTGAGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACCCCTTA
TAATCCGCACCACCTGCCATTGCGGCCCATCCTGCGACCTCGAAAGTACCCTAACAGGCCCAGCAAAACG
CCAGTGCACGAAAGGCCCTATCCCTGCCCAGCAGAAGGTTGTGATAGGAGGTTCTCACGCTCTGATGAGC
TGACCAGGCACATCCGAATCCACACGGGCCACAAGCCCTTCCAGTGTCGGATCTGCATGCGAAACTTCAG
CCGAAGTGACCACCTTACTACTCACATCCGAACCCACACCGGGGAGAAGCCCTTTGCCTGTGACTATTGT
GGCCGCAAGTTTGCCAGGAGTGACGAAAGGAAGCGCCACACCAAGATCCACCTTCGGCAGAAGGAACGGA
AGAGCAGTGCTCCCTCTGCACCTCCATCTGCCCAGTCTTCAGCCTCTGGTCCTGGGGGCTCGCAGGCCGG
GGGCAGCCTGTGCGGTAACAGCGCCATTGGAGGACCACTGGCCTCCTGCACCTCTCGAACCAGGACACCG
TGA

Translation (420 aa):
MNGVAGDGMINIDMTGEKRPLDLPYPSSFAPISAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSAGI
LQGVTPPASTTASSSVTSASPNPLATGPLGVCTMSQTQPELDHLYSPPPPPPPYSGCTGDLYQDPSAFLS
PPSTTSTSSLAYQPPPSYPSPKPAMDPGLIPMIPDYPGFFPSPCQRDPHGAAGPDRKPFPCPLDSLRVPP
PLTPLSTIRNFTLGGPGAGVTGPGASGGGEGPRLPGSGSAAVTATPYNPHHLPLRPILRPRKYPNRPSKT
PVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDYC
GRKFARSDERKRHTKIHLRQKERKSSAPSAPPSAQSSASGPGGSQAGGSLCGNSAIGGPLASCTSRTRTP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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