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Report for CCDS71203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71203.1 Public Mus musculus 2 Atp9a 23 108 98 CCDS HistoryNCBI Gene:11981Re-query CCDS DB by CCDS ID:71203.1Re-query CCDS DB by GeneID:11981See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109177.7 ENSMUSP00000104806.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109177.7Link to Ensembl Protein Viewer:ENSMUSP00000104806.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109177Re-query CCDS DB by Protein ID:ENSMUSP00000104806
Original member Current member NCBI NM_001289446.1 NP_001276375.1 Accepted alive Link to Nucleotide Sequence:NM_001289446.1Link to Protein Sequence:NP_001276375.1Re-query CCDS DB by Nucleotide ID:NM_001289446Re-query CCDS DB by Protein ID:NP_001276375Link to BLAST:NP_001276375.1

Chromosomal Locations for CCDS 71203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 168634772 168634908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168637501 168637704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168639070 168639127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168639882 168639990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168640631 168640695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168643862 168644017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168647685 168647749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168648555 168648699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168648791 168648880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168649529 168649627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168652568 168652738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168653494 168653577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168654176 168654268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168661929 168662090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168668006 168668218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168673477 168673589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168674792 168674934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168675201 168675361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168676142 168676218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168681976 168682051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168683713 168683793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168687341 168687435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168689299 168689350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168690966 168691024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168705123 168705231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168706195 168706308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168710832 168710976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168742088 168742101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3090 nt):
ATGCCCGGGGTGGGGTGCTGTGAGTGGCTGAGATGTTGCGGTGGAGGGGAGCCCAGGCCCCGTACTGTCT
GGTTGGGACACCCCGAGAAGAGGGACCAGCGGTACCCTCGAAATGTCATCAACAACCAGAAGTACAATTT
CTTCACATTTCTTCCTGGGGTGTTGTTCAGCCAGTTCAGATACTTCTTCAACTTCTACTTCCTGCTTCTC
GCCTGCTCGCAGTTCGTCCCAGAGATGAGGCTTGGCGCCCTGTACACCTACTGGGTTCCTCTGGGCTTCG
TGCTGGCTGTCACCATCATCCGTGAGGCAGTAGAGGAGATCCGATGTTATGTGCGTGACAAGGAGATGAA
CTCCCAGGTCTACAGCCGGCTCACGTCACGAGGGACCGTGAAGGTGAAGAGTTCAAACATCCAGGTGGGA
GACCTCATCCTTGTGGAAAAGAACCAGCGGGTCCCTGCTGACATGATCTTCCTGAGGACGTCAGAGAAAA
ACGGCTCTTGCTTCTTGCGCACGGATCAGCTGGATGGAGAGACAGACTGGAAGCTTCGGCTCCCGGTGGC
CTGCACACAGAGGCTTCCCACGGCTGCTGACCTCCTGCAGATTCGGTCCTATGTGTACGCTGAAGAGCCC
AACATCGACATTCACAACTTCCTGGGGACTTTCACCAGGGAAGACAGTGACCCTCCGATCAGTGAGAGTC
TGAGCATTGAGAACACGCTGTGGGCCGGCACCGTCATAGCATCAGGCACTGTTGTAGGCGTTGTTCTCTA
CACTGGCAGAGAACTGCGGAGTGTCATGAATACTTCCGACCCCAGAAGTAAGATTGGCCTGTTCGACCTG
GAGGTGAACTGCCTCACCAAGATCCTGTTTGGTGCGCTGGTGGTGGTGTCGCTGGTCATGGTGGCCCTGC
AGCACTTTGCCGGCCGCTGGTACCTGCAGATCATCCGCTTCCTGCTCCTGTTTTCCAACATCATTCCTAT
CAGCTTGCGTGTGAACTTGGACATGGGCAAGATCGTGTACAGCTGGGTGATCCGCAGGGATTCCAAAATC
CCCGGGACCGTGGTTCGTTCCAGCACAATTCCTGAGCAGCTGGGCAGGATTTCGTACTTGCTCACAGACA
AGACAGGAACCCTGACCCAGAATGAGATGGTGTTCAAGCGGCTGCACCTGGGTACGGTGGCCTACGGCCT
GGACTCCATGGACGAAGTGCAGAGTCACATCTTCAGCATTTACACCCAGCAATCCCAGGATCCACCTGCT
CAGAAGGGCCCCACGGTCACCACCAAGGTTCGGAGGACCATGAGCAGCCGTGTCCACGAGGCTGTGAAGG
CCATTGCACTCTGCCACAACGTGACACCCGTGTACGAGTCCAATGGTGTGACGGACCAGGCTGAGGCTGA
GAAGCAGTTTGAGGACTCCTGCCGAGTGTACCAGGCATCCAGCCCGGATGAGGTGGCTCTGGTCCAGTGG
ACAGAAAGTGTGGGACTGACGCTGGTGGGTCGAGACCAGTCCTCCATGCAGCTGAGGACCCCTGGTGACC
AGGTCCTGAATCTCACTATCCTTCAGGTCTTCCCGTTCACCTATGAGAGCAAGCGGATGGGCATCATCGT
GCGGGATGAGTCCACGGGGGAAATCACGTTCTACATGAAGGGAGCAGACGTCGTCATGGCTGGCATTGTC
CAGTACAACGACTGGCTGGAGGAGGAGTGTGGCAACATGGCCCGGGAGGGACTACGTGTGCTGGTGGTAG
CCAAGAAGTCCCTCACAGAGGAGCAGTACCAAGACTTTGAAGCCCGCTACGTCCAGGCTAAGCTGAGTGT
GCATGACCGCTCGCTGAAGGTGGCCACGGTGATCGAGAGCCTGGAGATGGAGATGGAGCTGCTGTGCCTG
ACTGGTGTGGAGGACCAGCTGCAGGCAGATGTCAGGCCCACGCTGGAGACGCTGCGCAACGCTGGCATCA
AGGTTTGGATGCTAACAGGGGACAAGCTGGAGACAGCCACGTGCACAGCCAAGAACGCACATCTGGTGAC
CAGAAACCAAGATATCCATGTTTTCCGACTGGTGACCAACCGCGGGGAGGCCCACCTGGAGCTGAATGCC
TTCCGTAGGAAGCATGACTGTGCCCTGGTCATCTCTGGAGACTCCCTGGAGGTTTGCCTCAAATACTATG
AGTACGAGTTCATGGAACTGGCCTGCCAGTGCCCGGCTGTGGTGTGCTGCCGCTGTGCCCCAACCCAGAA
GGCCCAGATTGTTCGGCTGCTCCAGGAACGCACCGGGAAGCTCACCTGTGCAGTAGGGGACGGAGGCAAT
GACGTCAGCATGATCCAGGAATCCGACTGCGGCGTGGGCGTGGAGGGCAAGGAAGGGAAGCAGGCCTCGC
TGGCAGCGGACTTCTCCATCACCCAGTTCAAGCATCTCGGCCGCTTGCTCATGGTGCACGGTCGGAACAG
CTACAAGCGCTCGGCGGCCCTCAGTCAGTTTGTGATCCACAGGAGCCTCTGCATCAGCACCATGCAGGCT
GTCTTCTCGTCTGTGTTCTACTTTGCATCCGTTCCTCTCTACCAAGGCTTCCTGATCATTGGGTATTCTA
CCATCTACACGATGTTTCCCGTGTTCTCCCTGGTTTTGGACAAAGACGTGAAGTCGGAAGTCGCCATGTT
GTATCCTGAGCTCTACAAGGACCTGCTTAAGGGGCGGCCACTGTCCTACAAGACGTTCTTAATTTGGGTG
TTAATCAGCATCTATCAAGGGAGCACCATCATGTACGGGGCGCTGCTGCTGTTCGAGTCGGAGTTTGTAC
ACATCGTGGCAATCTCCTTCACATCCCTCATCCTCACTGAGCTACTGATGGTGGCGCTCACCATCCAGAC
GTGGCACTGGCTCATGACAGTGGCCGAGCTACTCAGCCTGGCCTGCTACATTGCCTCCCTGGTGTTCCTC
CATGAGTTCATCGATGTCTACTTCATTGCCACCCTGTCATTCCTCTGGAAGGTGTCCGTCATCACCTTGG
TCAGCTGTCTCCCCCTCTATGTCCTCAAGTACCTGCGGAGACGGTTCTCCCCACCCAGCTACTCGAAGCT
CACTTCCTAA

Translation (1029 aa):
MPGVGCCEWLRCCGGGEPRPRTVWLGHPEKRDQRYPRNVINNQKYNFFTFLPGVLFSQFRYFFNFYFLLL
ACSQFVPEMRLGALYTYWVPLGFVLAVTIIREAVEEIRCYVRDKEMNSQVYSRLTSRGTVKVKSSNIQVG
DLILVEKNQRVPADMIFLRTSEKNGSCFLRTDQLDGETDWKLRLPVACTQRLPTAADLLQIRSYVYAEEP
NIDIHNFLGTFTREDSDPPISESLSIENTLWAGTVIASGTVVGVVLYTGRELRSVMNTSDPRSKIGLFDL
EVNCLTKILFGALVVVSLVMVALQHFAGRWYLQIIRFLLLFSNIIPISLRVNLDMGKIVYSWVIRRDSKI
PGTVVRSSTIPEQLGRISYLLTDKTGTLTQNEMVFKRLHLGTVAYGLDSMDEVQSHIFSIYTQQSQDPPA
QKGPTVTTKVRRTMSSRVHEAVKAIALCHNVTPVYESNGVTDQAEAEKQFEDSCRVYQASSPDEVALVQW
TESVGLTLVGRDQSSMQLRTPGDQVLNLTILQVFPFTYESKRMGIIVRDESTGEITFYMKGADVVMAGIV
QYNDWLEEECGNMAREGLRVLVVAKKSLTEEQYQDFEARYVQAKLSVHDRSLKVATVIESLEMEMELLCL
TGVEDQLQADVRPTLETLRNAGIKVWMLTGDKLETATCTAKNAHLVTRNQDIHVFRLVTNRGEAHLELNA
FRRKHDCALVISGDSLEVCLKYYEYEFMELACQCPAVVCCRCAPTQKAQIVRLLQERTGKLTCAVGDGGN
DVSMIQESDCGVGVEGKEGKQASLAADFSITQFKHLGRLLMVHGRNSYKRSAALSQFVIHRSLCISTMQA
VFSSVFYFASVPLYQGFLIIGYSTIYTMFPVFSLVLDKDVKSEVAMLYPELYKDLLKGRPLSYKTFLIWV
LISIYQGSTIMYGALLLFESEFVHIVAISFTSLILTELLMVALTIQTWHWLMTVAELLSLACYIASLVFL
HEFIDVYFIATLSFLWKVSVITLVSCLPLYVLKYLRRRFSPPSYSKLTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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