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Report for CCDS59663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59663.1 Public Mus musculus 4 Zfp979 23 108 98 CCDS HistoryNCBI Gene:112422Re-query CCDS DB by CCDS ID:59663.1Re-query CCDS DB by GeneID:112422See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037565.13 ENSMUSP00000038153.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037565.13Link to Ensembl Protein Viewer:ENSMUSP00000038153.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000037565Re-query CCDS DB by Protein ID:ENSMUSP00000038153
Original member Current member EBI ENSMUST00000105720.7 ENSMUSP00000101345.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105720.7Link to Ensembl Protein Viewer:ENSMUSP00000101345.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105720Re-query CCDS DB by Protein ID:ENSMUSP00000101345
Original member Current member NCBI NM_145078.2 NP_659544.2 Accepted alive Link to Nucleotide Sequence:NM_145078.2Link to Protein Sequence:NP_659544.2Re-query CCDS DB by Nucleotide ID:NM_145078Re-query CCDS DB by Protein ID:NP_659544Link to BLAST:NP_659544.2

Chromosomal Locations for CCDS 59663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 147613027 147614048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147615280 147615406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147618417 147618491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGTTTGCTCCTCACCAAGAATCTGGGAGAAGAACAACTAAAAGAATGAGTGCTTCTCTGGAAAACACTG
CACAGTGTCTATTAACCTTCAAGGATGTGTTTTTGGACTTCTCATCAGAGGAATGGGAATGTCTCAATTT
TGCTCAGAGGACATTGTACATGGATGTGATGTTGGAGAATTACAACAATCTGTTGTTTGTGGAAAATCAC
TGCATATGTGGAAACTATGAGAAGGAGAAGGTCTTGGAACAAGACACACAGCACATTTTCAATGAGCATG
GGCATATCCAAGAGAAGTCTTTTAAATGTAATGAGTCTAACAATATAATTCATGAATCCTCCCAAAGTAC
ACCTCATAAAACTAACCACAGAGATGCCACTCTTCAATCTTCAAACCTAAAAAGACATAAAACTCGGACC
ACTAAAGAAGTTTGCACATATAAAGACTGTGTAAACCGTTTAAAGGTGTCTTCTACCATTAGTCTCAATC
AAGGAACCCACATAGAGAAGAAAGAACACAACAGAAATAAAAATCTTGATGAGGTTTTGGTTTCTAAACA
TAAACCCATTGTGAGACAAAACAATAGTGAAATGAACACTTACACTTGTGGTGAATTTGACAAATGCTTT
ACTCAGAGTGACAATCTTCAAAGTCAGCAGAGAATTTATCCATTAAAGAAATCTTACAAATATAGTGAAA
GTGACAAATGCTTTACACAAAAGTTCTATCTTGGTATCCATCAGAAAATTCATACTGGAGAGAAATTTTA
TAAATGTAATGAAAGTGACAAATGTTTTAAACACAAATTCAATCTTAGTATGCATCAGAGAATTCATACA
GGAGAGAAAACTTACAAATGCATTGAATGTAACAAATGCTTTATGCAACAATCCCTTCTTAGTAATCATG
AGAGAATTCATACAGGAAAGAAGCCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCACCAAGTTAG
TCTGAGTATTCATCAGAGAATTCATTCAGAAAAGAAACCTTCCAAATATAGTGAGTGTGAAAAATGCTTT
ACCCACAAATTTAATCTGAGAACACATCAGACAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAAT
GTGACAAATGCTTTACCCACCAAGTTAGTCTGCGTATTCATCAAAGAACTCATTCAGGAGAGAAACCTTA
CAAATGTACTGAATGTTACAAGTGCTTTGCTTAA

Translation (407 aa):
MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENH
CICGNYEKEKVLEQDTQHIFNEHGHIQEKSFKCNESNNIIHESSQSTPHKTNHRDATLQSSNLKRHKTRT
TKEVCTYKDCVNRLKVSSTISLNQGTHIEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCF
TQSDNLQSQQRIYPLKKSYKYSESDKCFTQKFYLGIHQKIHTGEKFYKCNESDKCFKHKFNLSMHQRIHT
GEKTYKCIECNKCFMQQSLLSNHERIHTGKKPYKCSECDKCFTHQVSLSIHQRIHSEKKPSKYSECEKCF
THKFNLRTHQTIHTGEKPYKCSECDKCFTHQVSLRIHQRTHSGEKPYKCTECYKCFA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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