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Report for CCDS59621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59621.1 Public Mus musculus 15 Ccdc166 23 108 98 CCDS HistoryNCBI Gene:223648Re-query CCDS DB by CCDS ID:59621.1Re-query CCDS DB by GeneID:223648See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59621.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000183130.2 ENSMUSP00000138115.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183130.2Link to Ensembl Protein Viewer:ENSMUSP00000138115.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183130Re-query CCDS DB by Protein ID:ENSMUSP00000138115
Original member Current member NCBI NM_146059.2 NP_666171.2 Accepted alive Link to Nucleotide Sequence:NM_146059.2Link to Protein Sequence:NP_666171.2Re-query CCDS DB by Nucleotide ID:NM_146059Re-query CCDS DB by Protein ID:NP_666171Link to BLAST:NP_666171.2

Chromosomal Locations for CCDS 59621.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75980767 75981687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75981801 75982229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1350 nt):
ATGGCGCCCAAGAAGAAGCGCGGACAAAACGCGGGGCGCAAGCAGGAAACTACAGAGCAACCGCTCTCGG
AGCGCGCGCAGTACCTACAGCGCGAGTACGCGTTGCTCTCAGAAAGCCTGGTGGCCTGTGAGCAGCGGAT
CGACGAGGTGCTGCAGGACAACGAGTTCCTGAACAGAGAGGCGCAGCGCCTGCGCGAAGAGAACCGGCTT
TATGTCGGTTACGTGAGCGCGCACGCTCTGCGCTGCGCCAACGCCGTCGTGCGCGTCGAAGACCAGAACC
GCATGGATCTGGCGCAGATCCGGTGGCAGCGAGCGGAGCTAGCGTCCTTCTACCACGGCCGTGAGGACGG
GGTGCGCGCTCAGCTGCAGGAAATGAAGAAGCGCGCGGAAAACATGACGCAGCGGGTGCAGGAGCTCCAG
CCCTACAAGGAGCTGCAGCTGGAGCAGCTGGCGCGAATCCGGACCCTGGAGCGCGAGCTGCTGCACATGC
GCGTGGAGCACACGCAGCTCCTCCACGGGGTGAAGCGACGCTTCCTAGATGAGAAGACGGCTTTCGAGCG
GGAGGCGCGGCTGCAAGTGCAGTCCCTGACGCGCCGCTCCGAGCGGGAGGCCGCACGTTCCCTCATTTCC
CACGCACAGGCCCTCAAGGCGGACAACGGGTATCTCCGACAAGAACTCATGAGACTTCTCCAGAGGACCC
AGTTACTGCAGGACATGCGACAGCAGCTGCTAGAGCAGCGGGAGCAGCTGCGCCGGGAGCATGTGGACTT
GAAGAACCTGGAGCAAATGCACGGCTGGTTGCAAAGGGGCCCCGGGGGGCCACCGCTCTGGCAGCCACCC
CAAAGCCTCCAACCCAGCTTGCGCATCGGGTCAACCAGTCACGTTTTAAAAGCCCAGGCTACGCCCCAGT
CAGTTCCAACCTCCCGGGGCCAATCCATGGATCTGTCACACCGACCCTCCAAGACTCCATCTATATTGTC
CAGTGAGTCTCTTCCGGGCCTATCTCAGAAGGCTGGGTCAGTGATTGCTCTCCGGAGTCCATCACATCCA
GGATCTCGAGTCTCATCTCTGACTCCATCACGCAAGGACTCGCGTGTCTCATCCGCGACCCCGTCACGCA
AGGGCTCCAGGGTTCCATCCATGACCTCTGGTACCTTGCGGTCGCGCGAGGGCTCTCGGATCTCTCCACA
GCCCTCCTTGCGTGAGGTCTCTCCAGAAATTGACACACCTGCAAAGTCCAGTTCCAAGCTTCCCACAGCC
CTGTTGGAAGATCAGGCCCCTCTCAGCCCACAGTTGGAGGAGGCAGAAAACGCTGAAGACGACACAGAAA
CTGTCTTGGAGCAAGCCTGA

Translation (449 aa):
MAPKKKRGQNAGRKQETTEQPLSERAQYLQREYALLSESLVACEQRIDEVLQDNEFLNREAQRLREENRL
YVGYVSAHALRCANAVVRVEDQNRMDLAQIRWQRAELASFYHGREDGVRAQLQEMKKRAENMTQRVQELQ
PYKELQLEQLARIRTLERELLHMRVEHTQLLHGVKRRFLDEKTAFEREARLQVQSLTRRSEREAARSLIS
HAQALKADNGYLRQELMRLLQRTQLLQDMRQQLLEQREQLRREHVDLKNLEQMHGWLQRGPGGPPLWQPP
QSLQPSLRIGSTSHVLKAQATPQSVPTSRGQSMDLSHRPSKTPSILSSESLPGLSQKAGSVIALRSPSHP
GSRVSSLTPSRKDSRVSSATPSRKGSRVPSMTSGTLRSREGSRISPQPSLREVSPEIDTPAKSSSKLPTA
LLEDQAPLSPQLEEAENAEDDTETVLEQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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