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Report for CCDS59575.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59575.1 Public Mus musculus 12 Rnf113a2 23 108 98 CCDS HistoryNCBI Gene:66381Re-query CCDS DB by CCDS ID:59575.1Re-query CCDS DB by GeneID:66381See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59575.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000183146.1 ENSMUSP00000138536.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183146.1Link to Ensembl Protein Viewer:ENSMUSP00000138536.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183146Re-query CCDS DB by Protein ID:ENSMUSP00000138536
Original member Current member NCBI NM_025525.2 NP_079801.2 Accepted alive Link to Nucleotide Sequence:NM_025525.2Link to Protein Sequence:NP_079801.2Re-query CCDS DB by Nucleotide ID:NM_025525Re-query CCDS DB by Protein ID:NP_079801Link to BLAST:NP_079801.2

Chromosomal Locations for CCDS 59575.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 84417336 84418349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGGCAGAACAAGTTTCTCAGGGAAAGTCGGAGGATCAGGTGTGCACCTTCCTCTTCAAAAAGCCCGGGC
GGAAAGGAAGTGCTGGCCGTCGGAAGCGGCCGGCGTGCGACCCGGAGTCTGGGGAAAGCGGAAGCAGTAG
CGACGAAGGATGCTCGGTTGTGCGACCGGAGAAGAAGCGGGCGGCCCACAATCCGATGATCCAGAAGACG
AGTGGCAGCGGTAAACAGAAAGGGGCCTACTGTGATCTGAGCAGCGAAGAGGAGGAGAAGGCGGGGAATG
AGAGTCTAGGCGTCGTCTACAAGTCCACGCGCTCGGCGAAACCGGTGGGGCCCGAGGATATGGGGGCCAC
AGCAGTTTACGAGTTGGACACTGAGAAAGAACGAGACGCACAGGCCATTTTTGAGCGCAGTCAGAAAATC
CAGGAGGAGCTGAGAGGCAAGGAGGATGACAAAATCTATCGTGGAATTAATAATTACCAGAAATACATGA
AGCCCAAGGATACATCCATGGGCAATGCCTCCTCTGGCATGGTAAGAAAGGGCCCCATCCGAGCCCCTGA
ACATCTACGCGCTACTGTGCGCTGGGATTACCAGCCTGATATTTGTAAGGACTACAAGGAGACTGGCTTC
TGTGGCTTTGGAGACAGCTGCAAATTCCTCCATGACCGTTCAGATTACAAGCACGGATGGCAGATAGAAC
GTGAACTCGATGAGGGCCGCTACGGTGTGTATGAAGACGAAAACTATGAAGTAGAAAGTGATGATGAGGA
GATACCATTCAAATGTTTCATCTGTCGCCAAACCTTCCAGAATCCGGTTGTCACCAAGTGTAAACATTAT
TTCTGTGAGACCTGTGCACTGCAGCATTTCCGAACCACTCCACGATGCTATGTTTGTGAGCAACAGACCC
ATGGGGTTTTCAATCCTGCGAAAGAACTGATTGCTAAACTGGAGAAGTATCGAAAAGCAGAGGGTGGTGC
TTCCAGCACCCCAGAAGACGCCGATGGGATCTAA

Translation (337 aa):
MAEQVSQGKSEDQVCTFLFKKPGRKGSAGRRKRPACDPESGESGSSSDEGCSVVRPEKKRAAHNPMIQKT
SGSGKQKGAYCDLSSEEEEKAGNESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQAIFERSQKI
QEELRGKEDDKIYRGINNYQKYMKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGF
CGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYEDENYEVESDDEEIPFKCFICRQTFQNPVVTKCKHY
FCETCALQHFRTTPRCYVCEQQTHGVFNPAKELIAKLEKYRKAEGGASSTPEDADGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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