NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS57314.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57314.1 Public Mus musculus 4 Zfp984 23 108 98 CCDS HistoryNCBI Gene:100041677Re-query CCDS DB by CCDS ID:57314.1Re-query CCDS DB by GeneID:100041677See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57314.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105734.9 ENSMUSP00000101360.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105734.9Link to Ensembl Protein Viewer:ENSMUSP00000101360.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000105734Re-query CCDS DB by Protein ID:ENSMUSP00000101360
Original member Current member EBI ENSMUST00000122309.1 ENSMUSP00000114023.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122309.1Link to Ensembl Protein Viewer:ENSMUSP00000114023.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122309Re-query CCDS DB by Protein ID:ENSMUSP00000114023
Original member Current member NCBI NM_001127189.3 NP_001120661.1 Accepted alive Link to Nucleotide Sequence:NM_001127189.3Link to Protein Sequence:NP_001120661.1Re-query CCDS DB by Nucleotide ID:NM_001127189Re-query CCDS DB by Protein ID:NP_001120661Link to BLAST:NP_001120661.1

Chromosomal Locations for CCDS 57314.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 147754749 147756235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147757702 147757828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147761221 147761250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGAGTGTGTCTCTGGTAAATACACCACAGGGTCTGTTAACCTTCAAGGACGTGGCCTTGTACTTCTCAC
TGGAGGAATGGGAATGTCTCAGTTTTGCTCAGAGGACACTGTACATGGATGTAATGTTGGAGAATTACAA
CAATCTTTTGTTCGTGGAAAATCATTGCATACATGGAAAGTATGGGAAGGTCTTGGGTGAAGAGAGCCAG
TACATTGTCCATGAACACGTGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTATCAAGGTGATTC
TTGAATCCCCCCAATGTACACCTTACAAAACTAATCACAGCTCTCTTCAATACTCGAACCAAAAAAGACT
TAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTGTAAGTTTGTTTTCTACC
ATTAGTCTCAATCAAGGAATCCACCTGCAGAAGAAAAAACACAACCGAAATGCAGAATTTGAGAAGGTTT
TTGTTTCTAAACATAAAGTCATGGTGAAACGAAACAATACTGGAGTGAACCCTTACAAATGTAGTGAATT
TGACAAATATCTTACCCAGAGAGAAAAACTTCAAAGTCAGCAGAGAATTTATCATGGAAAGAAACCTTAC
AGAAGTAGTAAAAGTGACAAATGCTTTACCCATCAGATCCATCTTAGTATCCATCAGGGAATTCATGCAG
AAGAGAAAATTTACAAATGTAGTGAATGTGACAAATGCTTTACCCACAAATCCCATCTTAATATTCATCA
GAGAATTCATACAGGAGAGAACCCTTACAAATGCAGTGAATGTGACAAATGTTTTAAACACAAATTCAGT
TTTAGTATGCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTA
CCCAAAAATCTCATCTTAGCGTTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATG
TGACAAATGCTTTACCCACAAATCCCATCTTAATAGTCATCAGAGAATTCATACAGGAGAGAAACCTTAC
AAATGTAGTGAATGTGACAAATGCTTTACTAAAAACGGGAGTCTGAGAATTCATCAGAGAATTCATACAG
GAGAGAACCCTTACAAATGCAGTGAATGTGACAAATGCTTTACCCACAAATCCAATCTTAATATTCATCA
GAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCACAAATCCCAT
CTTAATAGTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTA
CCCGAAAATTCCATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAACCCTTACAAATGCAGTGAATG
TGACAAATGCTTTACCCAAAAATCCAATCTTAATATTCATCAGAGAATTCATACAGGAGAGAAACCTTAT
AAATGCAGTGAATGTGACAAATGCTTTACTGAAAAAGGCAGTCTGAGAATTCATCAGAGAATTCATACAG
GAGAGAATCCTTACAAATGCAGTGAATGTGACAAATGCTTTACCCGAAAATTCCATCTTAGTATTCATCA
GAAAATCCATACAGGAGAGAAACCTTACAAATAG

Translation (547 aa):
MSVSLVNTPQGLLTFKDVALYFSLEEWECLSFAQRTLYMDVMLENYNNLLFVENHCIHGKYGKVLGEESQ
YIVHEHVNIQEKSSKWDKLIKVILESPQCTPYKTNHSSLQYSNQKRLKPRNTKEVCKYNDSVNSVSLFST
ISLNQGIHLQKKKHNRNAEFEKVFVSKHKVMVKRNNTGVNPYKCSEFDKYLTQREKLQSQQRIYHGKKPY
RSSKSDKCFTHQIHLSIHQGIHAEEKIYKCSECDKCFTHKSHLNIHQRIHTGENPYKCSECDKCFKHKFS
FSMHQRIHTGEKPYKCSECDKCFTQKSHLSVHQRIHTGEKPYKCSECDKCFTHKSHLNSHQRIHTGEKPY
KCSECDKCFTKNGSLRIHQRIHTGENPYKCSECDKCFTHKSNLNIHQRIHTGEKPYKCSECDKCFTHKSH
LNSHQRIHTGEKPYKCSECDKCFTRKFHLSIHQRIHTGENPYKCSECDKCFTQKSNLNIHQRIHTGEKPY
KCSECDKCFTEKGSLRIHQRIHTGENPYKCSECDKCFTRKFHLSIHQKIHTGEKPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH