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Report for CCDS56841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56841.1 Public Mus musculus 12 Gm527 23 108 98 CCDS HistoryNCBI Gene:217648Re-query CCDS DB by CCDS ID:56841.1Re-query CCDS DB by GeneID:217648See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56841.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058135.5 ENSMUSP00000059435.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058135.5Link to Ensembl Protein Viewer:ENSMUSP00000059435.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000058135Re-query CCDS DB by Protein ID:ENSMUSP00000059435
Original member Current member NCBI NM_001025605.1 NP_001020776.1 Accepted alive Link to Nucleotide Sequence:NM_001025605.1Link to Protein Sequence:NP_001020776.1Re-query CCDS DB by Nucleotide ID:NM_001025605Re-query CCDS DB by Protein ID:NP_001020776Link to BLAST:NP_001020776.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020776.1 310 Q4KL13 310 100% 0 0

Chromosomal Locations for CCDS 56841.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 64920806 64921329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64922325 64922414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64923507 64923641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 64924160 64924343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGAAGACACTGTTTGAAGAGATCAAAGCATCAATTAAAAATAACTATAACCAAGATCGATCATTTTGGA
GGCCTGTTCTTCCTTGGGGAGGAGTTTTTACTATCAAAGCTGGCCGCAAAGCAGTATCTTGTACACCCCT
CTATGTTGAGATCAGACTGAAAAATACCTGCACCATAGATGGATTCTTGATGTTACTGTATGTCATTCTT
AATGAAAACGAAAGCTTCCCCAGGGAACTCTCTCTGCATTTTGGCCGGGAGTTTGTCGACTGTTTTCTTT
ATTTAATGGACACCTATAGTTTTACAACTGTGAAGCTGCTTTGGATTTGGGACAAGATGGAAAAACAGCA
ATACAAATCTGAAGTTCATAAAGCTTCATTAGTAATTGATTTGTTTGGGAACGAGCATGATAATTTTACA
AAAAATCTTGAAAATCTTATGTCTACCATTCAAGGGAGTTACTGCTCTAACTGGCACTGCCCTACCCGAG
TGCAGGAAGATCAGCAGCGCACCATTAGCATAAATCCTCCCCAAGAAATTCCACATGGAAACTTGATACG
ACTGGCTGTGGATGAGTTATTCTGTTCCAAGATTGAACTTTGTGAAGAGCGTGGGTGTGGTGGCTTAAGA
GAATTTTCCCAGCGAGTTTTCTGCCACGGGGCACCCCCTTTTGTTGTGTTAAATATGCAGCATTGGAAAC
CTGAAGACCTGGCATATGTACCCTATTACTTGGATTTATCTGATCACAAATATTTGCTGGAAGGCGCCAC
TTTATTTAACAAAGAGGAGCATCATTATTCTGCAGCCTTCCAGATTGACGGACATTGGATGCACTATGAT
GGCCTCAGAAATGTGAATTTAATTTTGTTAAATAAACCCCCAGAGTTTCTCCTCTTGTCATCATTGGTTT
ATATTCGAGCAACAGAGAAATAA

Translation (310 aa):
MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVIL
NENESFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLVIDLFGNEHDNFT
KNLENLMSTIQGSYCSNWHCPTRVQEDQQRTISINPPQEIPHGNLIRLAVDELFCSKIELCEERGCGGLR
EFSQRVFCHGAPPFVVLNMQHWKPEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYD
GLRNVNLILLNKPPEFLLLSSLVYIRATEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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