CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS56707.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
56707.1 |
Public |
Mus musculus |
10 |
Jmjd1c |
23 |
108 |
98 |
|
Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 56707.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000051446.15 |
ENSMUSP00000056227.9 |
Accepted |
alive |
|
|
|
NCBI |
NM_207221.3 |
NP_997104.2 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 56707.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7593 nt): ATGGCGGTGGAGACGCGGCCCGAGCTGGTGGGGAAGCGGTTCCTGTGCGTGGCGGCCGGCGAGGACGCGC GTCCGGAGCGCGGGCAGAGCGGCTGCGGGCGCGGCTGGCGGGCGGGGGTCATCCGAGCCGTGTCCCACCG CGACCGCGGCCACCCGGACCTGGCGGTCTACGTGGAATTTGATGACCTTGAGTGGGATAAACGGGAGTGG GTTAGAGTTTATGAAGATTTTTCAACTTTCTTGGTGGAATATCACTTAATCTGGGCCAAAAGGAAGGACC CTAGCCAGACTCAGGGATCAAAGAGCAGACAAATTCAGTGGCCTGCACTGACCTTCAAACCATTGGTTGA AAATAGTATACCTAGTTCTATCACTGCAGTAGAATTCCTTATAGATAAGCAACTGGATTTTTTAACAGAA GATAGTGCCTTTCAGCCATACCAGGACGACATAGACAGCTTAAAGCCCGTACTCAGGGACAACCCACAGC TGCACGCGGAAGTGAAAGTCTGGGTGAAGGAACAGAAGGTCCAGGAGATTTTTATGCAAGGTCCTTATTC ATTAAATGGATACAGAGTGAGAGTCTATAGACAAGATTCTGCCACCCAGTGGTTTACTGGCATAATTACT CATCATGATCTCTTCACCCGCACCATGATCGTTATGAATGATCAGGTACTAGAACCACAGAATGTCGATC CTTCTATGGTTCAAATGACCTTTCTAGATGATGTCGTTCACTCTTTGTTAAAAGGTGAAAATATTGGCAT TACATCACGGCGAAGGTCTCGTGCCAGTCAAAATATCAGCACTGTTCACGGTCATTATACACGTGCTCAA GCAAATAGTCCCAGACCAGCAATGAACTCTCAAGCTGCTGTACCAAAACAGAACACACACCAGCAACAGC AACAAAGAAGTATTCGTCCAAATAAGAGGAAGGGTTCAGATAGCAGCATACCCGATGAAGAGAAGATGAA GGAAGATAAATATGATTGTGTATCACGAGGAGAAAATCCTAAAGGTAAGAACAAGCACGTGGTGACAAAA CGGCGGAAACCTGAGGAGGCCGAGAAGAGGCTGAGCATGAAAAGGCTCCGGACAGACAATGCCTCTGACG CCTCCGAGAGCAGTGACGCAGAGAGCTCCAGCAAGAGAGTGACTGAGACTTCCTCCTCTGAACCAATGCC AGAGTATGAACCGAAAAATAAAGTCACCTCAAAGGTAAATGGAGAGGAGGGACAGTCCCAGGCTGCTGAA GAGGCAGGAGAAGAGACCCTGATAGATACTCGGCCTCCCTGGGACCAGATGCAGGAAGATAAAAACCACA ACGAAGGGGAGAAGCCCAAGTCCACGGACAGCCACCTTCAAGACAAAATGACTCTCCGTTCATCTGAGCA AGCCACAGTTGCTGACCACAATTCTAATGATTCAGTCCTTCAAGAATGCAATGTGGAAAACCAACGCACA GTGGAATTATTACCAAAGGACAGGTTAGTGTCCAGAACACCGACACCCAAATGTGTTACGGATATCAAGA ACGACACTCATTCTGAGAGGGCGGCTCAGGAAAATTTAAATACTTTTGGCCTCCAGACACCTGAGAACAT GGATCCAAATGTTAGTGATTCCAAACATTCAAATGCTAAATACCTAGAAACAGCAAAGCAAGATTGTGAC CAGAGCTGGGTCAGTGATGTAGTGAAAGTGGATTTAACTCAGTCAAGTGTTACAAATGCTCCTTCAGGAA GTGATAAGCGCGATACGGAGAAAGAGAGAAATCACTATGTCTCATACATGTCTTCATTAAGTGCAGTTTC TGTCACAGAGGATCAGCTACATAAACGAAGTCCACCCCCAGAAACTATAAAAGCTAAACTAACTACTTCA GTAGATACCCAGAAGGCAAAATCCAGTTCTTCACCTGAAGTTGTTAAACCCAAGATCACTCATTCTCCTG ATTCTGTGAAGTCTAAAGCTGCTTATGGGAACAGTCAAGCTGTTGGTGAGCGAAGGCTGGCAAATAAAAT AGAGCATGAGTTATCCAGAGGTAGTTTCCATCCAGTTCCTACTCGAGGCAGTGCTTTGGAAACTACAAAG AGCCCTCTTATCATTGATAAAAACGAGCACTTCACAGTCTATAGGGATCCTGCTCTTATTGGATCAGAAA CAGGAGCTAATCACATTTCACCTTTTTTGAGCCAGCATCCTTTTTCTCTTCATTCCTCATCCCATAGAAC CTGTTTAAACCCAGGTACCCATCACCCTGCCTTAACGCCAGGACCCCACTTACTAGCTGGGTCAACTAGT CAAACTCCATTACCTACCATTAACACTCACCCTCTCACTAGTGGTCCACACCATCCTGTCCATCACCCTC ATTTGCTTCCCACTGTGTTACCTGGAGTGCCTACTGCCTCTTTACTCGGTGGCCACCCACGTCTAGAGAG TGCTCATGCAAGCAGCTTGAGCCATTTAGCACTAGCACACCAGCAGCAGCAACAGTTGTTACAGCACCAG TCACCTCATCTTCTTGGACAAGCCCATCCTTCCGCTTCATATAATCAGCTTGGACTTTATCCAATTATTT GGCAATATCCGAATGGAACACATGCATACTCAGGACTTGGTCTCCCTTCTTCTAAGTGGGTTCACCCAGA AAATGCAGTTAATGCTGAAGCTTCATTAAGGAGGAATTCTCCCAGTCCTTGGCTACATCAACCCACTCCT GTGACCTCAGCGGATGGTATTGGATTACTTAGTCACATTCCTGTCAGACCTTCCAGTGCAGAGCCTCATC GACCTCACAAGATTACAGTGCATTCCAGTCCCCCACTGACAAAGACATTAGCAGATCACCACAAAGAAGA ATTGGAGAGGAAAGCTTTTATGGAACCATTACGGTCTAATGCATCCACATCAGTAAAAGGTGACCTGGAT CTTAATAGGTCACAGGCAGGAAAAGATTGTCACTTGCATAGGCATTTTGTGGGTCCAAGGCCACCCCAGG AGACTGGAGAGAGACTGAACAAATACAAGGAGGAACATCGTCGGATTCTTCAGGAGAGTATTGATGTGGC TCCATTTACAACCAAAATCAAGGGTCATGAGGTTGAAAGAGAGAATTACTCCAGAGTAGTACCATCATCT TCTAGTCCTAAAAGCCATGCTATCAAACAAGATAAAGACGTAGACCGCTCCGTGTCAGAGATTTATAAGA TGAAGCACTCAGTGCCTCAGAGTTTGCCCCAGAGTAACTACTTCACTACTTTATCTAATAGTGTGGTCAA TGAGCCACCAAGATCCTACCCATCCAAAGAAGTTTCCAACATTTACACTGAGAAACAAAATAATAACCTT TCTGCAACAGCCAATCCTCAAACTCATTCTTTTATATCATCTCTTTCGAAGCCTCCACCTTTGATTAAAC ACCAACCAGAAAGTGAAAGTTTAGTGGGCAAGATACCAGACCATCTTCCCCATCAGAGTGCATCTCACTC AGTAACAACGTTCAGAAGTGATTGTCGGAGCCCTACCCATCTGACTGTTTCTTCTACTAATGCACTCCGC AGCATGCCTGCTCTGCACAGGGCACCAGTATTCCATCCACCAATCCACCACAGTTTGGAAAGAAAGGAAA GCAGCTACAGTAGCCTTTCCCCTCCAACACTGACACCGGTGATGCCAGTAAATGCTGGTGGCAAAGTTCA AGAATCTCAGAAGCCTCCAACTCTAATTCCTGAGCCAAAAGACTCTCAGTCAAATTTTAAGAATTCTTCT GATCAGAGTCTAACGGAAATGTGGAGATCTAATAACAACCTCAACAGAGAGAAAGCTGAGTGGCCCGTGG AAAAGAGTAGTGGAAAGTCCCAGGCTGCTGTGGCATCTGTCATTGTTCGTCCACCTTCTAGTACAAAAGT TGATAGTGTGCCATCTGTACCATTAGCTTCCAAAGATCGAGTTTGTGAAAGATCTTCATCTGGGGCAAAT AAAACAGATTACCTCAAACCAGAAGCCGGAGAGACTGGAAGAATTATTCTACCAAATGTGAATTTAGAAA GTGCTCATGTGAAATCTGAAAAAAACTTTGAAGCTGTCTCCCAGGGCAACGTTCCTGTTTCAGTCATGTC TGCTGTAAATGTAGTCTCTACTACCAAAGCAGATGTGTTCACATCTGCTGCCACTACCACCAGTGTCTCC AGCTTGAGTAGTGCAGAAACAAGTTATTCTTTATCAAATACCATTTCGGCCTCTACACCCTTCGAATGTA CTTCTTCAAAAAGTGTTGTTAGTCAGGCAGTGGCGCAAGCAAAGGACTGCACAGTCAGCACCGCGGTTCC AGGCACTCTGGCCTGTAGTAAGACAGGAAGTGCTGTTCAGCCCGGCTCTGGCTTCTCAGGCACAACTGAT TTTATTCATTTAAAAAAGCACAAGGCAGCGTTGGCTGCAGCTCAGTTTAAAAATAGTAGTGTCAGTGAGG CTGAACTTAATACTGTGAGAAATCAGACAGTGGCAGCCTCTCTTCCCCTGGATAGCACCATGACCTGCAC TGCAAGTAACAAAGCAATCTCTGTAGGAAATGGGCCAGCAGCCCAGTCCAGTCAGCCCAACTACCACACT AAACTGAAGAAGGCCTGGCTCACCAGACATTCAGAAGAAGATAAAAATACTAATAAAATGGAAAATTCAG GGAATTCTGTATCCGAAATTATTAAGCCATGTTCTGTCAACTTAATAGCCTCTACATCTAATGATATAGA AAATCGTGCAGATGGCAGAGTCGCTGTAGATAAATATGGAAGAGATGAGAAAGTCAGCAGGAGAAAAGCC AAAAGAACTTACGAATCTGGCTCTGAAAGTGGAGACTCAGATGAGAGCGAAAGCAAGTCGGAGCAGAGGA CTAAACGGCAGCCGAAGCCAACTTATAAAAAGAAGCAGAACGACCTGCAGAAGAGGAAAGGCGAGGTCGA AGAGGACTCGAAGCCTAATGGAGTTCTCAGCAGGAGCGCCAAGGACAAAAGTAAACTGAAGTTGCAGAAC AGTAATACTGGCGTTCCTCGTTCCGTGCTGAAAGACTGGCGGAAGGTCAAGAAGCTGAAGCAAACTGGAG AATCATTTCTGCAGGATGACTCCTGCTGTGAGATAGGTCCCAACTTACAGAAGTGCCGAGAGTGCAGACT TATCCGGAGTAAGAAGGGGGAAGAATCAACTCACTCACCGGTGTTTTGTAGATTTTACTACTTTAGGAGA TTGTCCTTTAGTAAGAATGGAGTAGTCAGAATAGATGGTTTCTCTTCTCCTGATCAATACGATGATGAAG CCATGAGTTTATGGACCCATGAAAATTATGAAGATGATGAAGTAGATGTTGAAACCTCTAAGTATATCTT GGACATAATAGGTGATAAGTTCTGTCAGTTAGTAACGTCTGAGAAAACAGCGTTGTCCTGGGTGAAAAAG GATGCCAAAATTGCATGGAAAAGGGCAGTTCGAGGTGTCCGGGAGATGTGTGATGCGTGCGAGGCCACAC TGTTCAACGTCCACTGGGTTTGCCGCAAGTGTGGATTTGTGGCTTGCTTGGACTGTTACAAGGCCAAGGA AAGGAAGAGTTCTAGAGATAAAGAGCTGTATGCTTGGATGAAGTGTGTGAAAGGCCAGCCCCATGACCAT AAGCATCTGATGCTGACTCAGATTATCCCTGGCTCTGTGTTGACAGACCTTCTTGATGCCATGCACATTC TTAGGGAAAAATATGGTATTAAATCCCATTGTCACTGTACAAACAGACAGAATTTACAAGGTGGAAATGT TCCTACAATGAATGGTGTGTCTCAAGTTCTACAGAATGTTCTTCACCACAGTAATAAGACTTCTGTGTCC CTGCCTGAGTCTCAGCAGCAGAACAGCCCTCAGAAATCTCAGACTAACGGCAACAGTAGCCCTGGAAGTG CAAGTACAGACAGCAGGTTGACACCTCCAGAGTCCCAGTCACCGCTGCACTGGCTAGCTGATCTTGCTGA GCAGAAATCCAGAGAGGAAAAACAAGAAAACAAAGAATTTACTCTTGAAAGGGAAATCAAAGAAGATGGA GACCAAGATGCCTCTGATTCTCCAAATGGCAGCACATCACCTCCAGCATCCCAGAGCAACGAACAGGGTT CAACCCTACGTGATTTGCTGACCACAACAGCTGGCAAGCTTCGTGTGGGCTCTACAGATGCTGGCATTGC CTTTGCGCCAGTATATTCAATGGGAACCTCAAGTGGCAAAGGTGGCCGGACTATGCCTAACATTCTTGAT GACATCATTGCTTCAGTTGTTGAAAACAAAATTCCACCAAATAAAACCTCCAAGATCAATATAAAATCAG AACCTAATGAAGAACCCAAAGAAAGCAGTCTGCCTGCCACGGATGAAAGCAATAAGTCTTATCGTGACAT ACCACATTCTTGGATCTGTGACCAGCATATTTTATGGCTTAAAGATTACAAGAATAGTAATAACTGGAAG CTTTTCAAAGAGTGCTGGAAACAAGGACAGCCTGCAGTGGTTTCCGGTGTGCATAAGAAAATGAACATTA GCTTGTGGAAGGCAGAATCAATTAGTCTGGATTTTGGAGACCACCAAGCTGATCTCCTCAACTGCAAAGA CAGCATTGTTTCCAATGCCAACGTTAAGGAGTTCTGGGATGGTTTTGAAGAAGTGTCAAAACGTCAAAAA AACAAAGGTGGAGAAACAGTAGTATTAAAGTTGAAAGACTGCCCATCTGGGGAGGACTTCAAGGCCATGA TGCCAACAAGATATGAAGACTTTTTAAGATGTCTGCCATTACCAGAATATTGCAACCCAGAAGGGAAGTT CAATTTGGCCTCCCATTTGCCAGGGTTCTTTGTACGCCCTGATCTAGGACCCAGGCTGTGCAGTGCCTAT GGTGTTGCTGCTGCTAAGGATCATGATATAGGAACCACAAATCTTCACATTGAAGCTTCTGATGTTGTCA ATGTCCTAGTCTATGTCGGCATAGCAAAAGGAAATGGCGTCCTCTCAAAAGCAGGAATACTTAAGAAATT TGAAGAAGAAGAATTAGATGATGTTTTAAGAAAAAGATTAAAGGATTCGAGTGAAATCCCTGGTGCTCTA TGGCATATTTATGCTGGAAAAGATGTTGACAAGATAAGGGAATTTCTTCAAAAGATTTCAAAAGAACAAG GCCTTGAAGTTCTGCCAGAGCATGATCCAATCCGGGACCAAAGCTGGTATGTGAATAGAAAGCTCCGCCA GAGACTGCTTGAGGAATATGGGGTGAGAGCCTGCACTCTGATTCAGTTCCTTGGTGATGCCATTGTTTTG CCAGCAGGAACACTTCACCAGGTACAAAATTTTCACAGCTGTGTTCAGGTGACCGAAGACTTTGTCTCTC CAGAACATCTTGTACAGTCGTTTCACTTAACACAGGAGCTGAGGCTTTTGAAGGAAGAAATCAATTACGA TGATAAACTCCAGGTTAAGAATATCTTGTATCATGCAGTCAAGGAAATGGTGAGAGCTCTGAAGATGCAT GAAGATGAAGTAGAGGATATGGAAGACACCTAA
Translation (2530 aa): MAVETRPELVGKRFLCVAAGEDARPERGQSGCGRGWRAGVIRAVSHRDRGHPDLAVYVEFDDLEWDKREW VRVYEDFSTFLVEYHLIWAKRKDPSQTQGSKSRQIQWPALTFKPLVENSIPSSITAVEFLIDKQLDFLTE DSAFQPYQDDIDSLKPVLRDNPQLHAEVKVWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIIT HHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRASQNISTVHGHYTRAQ ANSPRPAMNSQAAVPKQNTHQQQQQRSIRPNKRKGSDSSIPDEEKMKEDKYDCVSRGENPKGKNKHVVTK RRKPEEAEKRLSMKRLRTDNASDASESSDAESSSKRVTETSSSEPMPEYEPKNKVTSKVNGEEGQSQAAE EAGEETLIDTRPPWDQMQEDKNHNEGEKPKSTDSHLQDKMTLRSSEQATVADHNSNDSVLQECNVENQRT VELLPKDRLVSRTPTPKCVTDIKNDTHSERAAQENLNTFGLQTPENMDPNVSDSKHSNAKYLETAKQDCD QSWVSDVVKVDLTQSSVTNAPSGSDKRDTEKERNHYVSYMSSLSAVSVTEDQLHKRSPPPETIKAKLTTS VDTQKAKSSSSPEVVKPKITHSPDSVKSKAAYGNSQAVGERRLANKIEHELSRGSFHPVPTRGSALETTK SPLIIDKNEHFTVYRDPALIGSETGANHISPFLSQHPFSLHSSSHRTCLNPGTHHPALTPGPHLLAGSTS QTPLPTINTHPLTSGPHHPVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQ SPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNSPSPWLHQPTP VTSADGIGLLSHIPVRPSSAEPHRPHKITVHSSPPLTKTLADHHKEELERKAFMEPLRSNASTSVKGDLD LNRSQAGKDCHLHRHFVGPRPPQETGERLNKYKEEHRRILQESIDVAPFTTKIKGHEVERENYSRVVPSS SSPKSHAIKQDKDVDRSVSEIYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQNNNL SATANPQTHSFISSLSKPPPLIKHQPESESLVGKIPDHLPHQSASHSVTTFRSDCRSPTHLTVSSTNALR SMPALHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDSQSNFKNSS DQSLTEMWRSNNNLNREKAEWPVEKSSGKSQAAVASVIVRPPSSTKVDSVPSVPLASKDRVCERSSSGAN KTDYLKPEAGETGRIILPNVNLESAHVKSEKNFEAVSQGNVPVSVMSAVNVVSTTKADVFTSAATTTSVS SLSSAETSYSLSNTISASTPFECTSSKSVVSQAVAQAKDCTVSTAVPGTLACSKTGSAVQPGSGFSGTTD FIHLKKHKAALAAAQFKNSSVSEAELNTVRNQTVAASLPLDSTMTCTASNKAISVGNGPAAQSSQPNYHT KLKKAWLTRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSNDIENRADGRVAVDKYGRDEKVSRRKA KRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEVEEDSKPNGVLSRSAKDKSKLKLQN SNTGVPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEESTHSPVFCRFYYFRR LSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDEVDVETSKYILDIIGDKFCQLVTSEKTALSWVKK DAKIAWKRAVRGVREMCDACEATLFNVHWVCRKCGFVACLDCYKAKERKSSRDKELYAWMKCVKGQPHDH KHLMLTQIIPGSVLTDLLDAMHILREKYGIKSHCHCTNRQNLQGGNVPTMNGVSQVLQNVLHHSNKTSVS LPESQQQNSPQKSQTNGNSSPGSASTDSRLTPPESQSPLHWLADLAEQKSREEKQENKEFTLEREIKEDG DQDASDSPNGSTSPPASQSNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTSSGKGGRTMPNILD DIIASVVENKIPPNKTSKINIKSEPNEEPKESSLPATDESNKSYRDIPHSWICDQHILWLKDYKNSNNWK LFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADLLNCKDSIVSNANVKEFWDGFEEVSKRQK NKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAY GVAAAKDHDIGTTNLHIEASDVVNVLVYVGIAKGNGVLSKAGILKKFEEEELDDVLRKRLKDSSEIPGAL WHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYGVRACTLIQFLGDAIVL PAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRALKMH EDEVEDMEDT
|