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Report for CCDS52379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52379.1 Public Mus musculus 7 Acsm2 23 108 98 CCDS HistoryNCBI Gene:233799Re-query CCDS DB by CCDS ID:52379.1Re-query CCDS DB by GeneID:233799See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52379.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098084.10 ENSMUSP00000095690.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098084.10Link to Ensembl Protein Viewer:ENSMUSP00000095690.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098084Re-query CCDS DB by Protein ID:ENSMUSP00000095690
Original member Current member NCBI NM_001177977.1 NP_001171448.1 Accepted alive Link to Nucleotide Sequence:NM_001177977.1Link to Protein Sequence:NP_001171448.1Re-query CCDS DB by Nucleotide ID:NM_001177977Re-query CCDS DB by Protein ID:NP_001171448Link to BLAST:NP_001171448.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171448.1 600 Q8K0L3-2 600 100% 0 0

Chromosomal Locations for CCDS 52379.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 119554469 119554535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119563497 119563681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119573113 119573323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119573552 119573759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119575610 119575756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119578082 119578235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119580356 119580435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119580613 119580736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119582706 119582786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119588821 119588922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119591027 119591154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119591263 119591362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119592223 119592342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119595914 119596009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGACTACTGGATCCTTGGACCTTCCATTCGTAGGCAGCCATCGTTGGATTAAATGGACCACAGCTTCTC
TGACTATGCATCATCTATGGAAAATTCCAAGACTTTTCACTCTCTGGGGGAATGAGATTTCCTGCCGTAC
TTTCCATATGAATATCAAGAAACTAATACCCATACAGTGGGGCCACCAGGAAGCACCTGCCAAGTTCAAC
TTCGCTAGTGATGTGATAGATCACTGGGCCAGCGTAGAGAAGGCTGGCAAGAGATCTTCAGGTCCAGCCC
TGTGGTGGATGAATGGCAGTGGGAAAGAAATAAAGTGGAGCTTCCGAGAACTGAGTGAAGCCAGTAAACA
AACGGCCAATGTTCTCTCGGGAGCCTGTGGCCTACATCGTGGGGACCGTGTGGCAGTAGTGCTTCCCCGA
ATCCCAGAGTGGTGGCTGATGATCCTGGGCTGCATGCGGACAGGCCTTGTTTTCATGCCTGGGACCATCC
AGATGAGATCCTCAGACATACTCTACAGGCTGCAGGCATCCAAGGCCAGGGCCATTGTGGCTGGGGACGA
AGTAGCTCAGGAAGTGGATGCTGTGGCCCCTGACTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTGAA
AACAGTCGAGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAGAGGCATCCACCATTCATCAGTGTGTGG
AGACAGAAAGCCGAGAATCAGCAGCCATCTACTTCACTAGTGGGACCAGTGGCCCTCCCAAGATGGCAGA
ACACTCCCACTGCAGCCTGGGCATCAAGGCCAAGATGGATGCTGCCAGCTGGACAGGCCTGAGTACTTCT
GACATAATATGGACCATCTCAGACACGGCTTGGATAATGAACATTTTAGGAGCGTTTCTGGAACCTTGGG
TATTGGGAGCATGCATATTTGTCCATCTTTTGCCAAAGTTTGATTCACAAACTGTTCTAAAGGTGCTTTC
CAGCTATCCCATCAATACCCTGGTGGGTGCCCCCATCATTTACCGGATGTTGCTACAACAGGATCTTTCC
AGTTACAAATTTCCACATCTGCATAGCTGCTTCAGTGGAGGAGAGACCCTTCTCCCAGAGACTCTGGAGA
ACTGGAAAGCCAAGACAGGACTGGAAATCCGAGAAATCTATGGCCAGACAGAAACGGGACTTATCTGCAG
AGTTTCCAGGACAATGAAAGTCAAACCAGGCTACCTGGGAACAGCCTTTGCTCACTATGATGTACAGGTC
ATAGATGAGCAGGGCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGCTATCAGGGTGAAGCCCATCT
GGCCTATCGGCATGTTCTCTGGATATGTGGACAATCCCAAGAAGACACAGGATAATATTCGAGGAGACTT
TTGGCTTATGGGAGACCGGGGAATCAAGGATCCAGAAGGGTATTTCCACTTCATAGGGCGGTCAGACGAT
ATCATTAATTCCAGTGGGTACCGGATTGGACCTTCCGAGGTGGAAAATGCACTGATGGAGCATCCTGCCG
TAAGCGAAACAGCAGTGATCAGCAGCCCAGACCCTTCCAGAGGAGAGGTGGTGAAGGCATTTGTGGTCCT
AGCCCCTGAATTCCTGTCCCATGACCGAGACCAGCTCACTAAGGTGCTTCAGGAGCACGTGAAGTCAGTG
ACAGCACCCTACAAGTACCCCAGGAAGGTGGAGTTCGTCTTAGACCTGCCCAAGACCGTCACAGGAAAAA
TTGAGCGAGCAAAGCTTCGAGCCAAGGAATGGAAAACATCAGGACGAGCCTAG

Translation (600 aa):
MTTGSLDLPFVGSHRWIKWTTASLTMHHLWKIPRLFTLWGNEISCRTFHMNIKKLIPIQWGHQEAPAKFN
FASDVIDHWASVEKAGKRSSGPALWWMNGSGKEIKWSFRELSEASKQTANVLSGACGLHRGDRVAVVLPR
IPEWWLMILGCMRTGLVFMPGTIQMRSSDILYRLQASKARAIVAGDEVAQEVDAVAPDCSFLKIKLLVSE
NSREGWLNFKALLKEASTIHQCVETESRESAAIYFTSGTSGPPKMAEHSHCSLGIKAKMDAASWTGLSTS
DIIWTISDTAWIMNILGAFLEPWVLGACIFVHLLPKFDSQTVLKVLSSYPINTLVGAPIIYRMLLQQDLS
SYKFPHLHSCFSGGETLLPETLENWKAKTGLEIREIYGQTETGLICRVSRTMKVKPGYLGTAFAHYDVQV
IDEQGNVLPPGKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDFWLMGDRGIKDPEGYFHFIGRSDD
IINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVVLAPEFLSHDRDQLTKVLQEHVKSV
TAPYKYPRKVEFVLDLPKTVTGKIERAKLRAKEWKTSGRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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