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Report for CCDS52055.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52055.1 Public Mus musculus 7 Eml2 23 108 98 CCDS HistoryNCBI Gene:72205Re-query CCDS DB by CCDS ID:52055.1Re-query CCDS DB by GeneID:72205See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52055.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048502.9 ENSMUSP00000037654.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048502.9Link to Ensembl Protein Viewer:ENSMUSP00000037654.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000048502Re-query CCDS DB by Protein ID:ENSMUSP00000037654
Original member NCBI NM_028153.1 NP_082429.1 Updated not alive Link to Nucleotide Sequence:NM_028153.1Link to Protein Sequence:NP_082429.1Re-query CCDS DB by Nucleotide ID:NM_028153Re-query CCDS DB by Protein ID:NP_082429
Current member NCBI NM_028153.2 NP_082429.1 Accepted alive Link to Nucleotide Sequence:NM_028153.2Link to Protein Sequence:NP_082429.1Re-query CCDS DB by Nucleotide ID:NM_028153Re-query CCDS DB by Protein ID:NP_082429Link to BLAST:NP_082429.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082429.1 668 Q7TNG5-2 668 100% 0 0

Chromosomal Locations for CCDS 52055.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19181204 19181223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19181709 19181737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19182270 19182440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19184790 19184955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19186102 19186171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19186261 19186371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19190718 19190813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19191584 19191718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19194009 19194108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19196197 19196351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19196493 19196618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19200500 19200631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19201124 19201191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19201565 19201653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19201830 19201927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19202509 19202596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19202977 19203072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19203902 19204032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19206086 19206211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGAGTAGTTTTGGAATTGGGAAAACCAAAGAAGTTATCTTCAGCATGGAGGAGGGATCCGTAAAGATGT
TTCTGCGGGGACGCCCTGTGCCCATGCTGATCCCGGACGAACTGGCGCCCACCTATAGCCTGGACACTCG
TTCTGAGCTGCCCTCCAGCCGGCTAAAGCTAGACTGGGTGTATCCTTTGACTAGCTCCCTTTCTGCCCTC
TTGGAAGAGGCCCTGGGCTTCTCCAGCTATGGCTATCGAGGCCGGGACTGCAGGGCCAACCTTTACCTCC
TGCCCACTGGGGAGGTGGTGTACTTTGTGGCCTCTGTGGCCGTACTGTACAGCGTGGAGGAGCAGAGACA
ACGACACTACCTGGGGCACAACGATGACATCAAATGTCTGGCTGTCCATCCAGATATGGTCACCATCGCC
ACAGGACAGGTGGCAGGCACCACAAAGGAAGGCAAGCCTCTGCCACCCCATGTGCGTGTGTGGGACTCGG
TTTCCCTTTCCACCTTACACGTCCTGGGCCTGGGGGTGTTTGACAGAGCTGTGTGCTGTGTGGCCTTCTC
CAAATCCAATGGGGGCAACCTGCTATGTGCAGTGGACGAATCCAACGACCATGTGCTCTCTGTGTGGGAC
TGGGCCAAGGAGAGCAAAGTGGTGGATAGCAAGTGCTCTAACGAGGCAGTGCTAGTGGCCACCTTCCACC
CCACTGATCCCAGCCTGCTGATAACCTGTGGCAAATCCCACATCTACTTCTGGAGCCTGGAGGGAGGCAG
TCTGAGCAAGAGGCAGGGCCTGTTCGAGAAACACGAGAAACCAAAGTACGTGCTGTGTGTGACCTTCCTG
GAAGGTGGCGATGTGGTCACTGGAGACTCTGGGGGGAACCTCTATGTCTGGGGCAAAGGTGGAAACCGCA
TCACCCAGGAAGTTCAAGGAGCCCATGATGGTGGCGTGTTTGCTCTCTGCGCCCTGCGGGACGGGACGCT
GGTGTCTGGAGGGGGCCGCGATCGTAGGGTGGTCCTCTGGGGTTCGGACTACAGCAAGGTGCAGGAGGTG
GAGGTCCCAGAGGACTTCGGCCCTGTACGCACCGTGGCAGAGGGCCGGGGAGACACACTGTACGTGGGGA
CCACCCGTAACTCCATCTTGCTAGGCTCGGTGCACACAGGGTTTTCGCTGCTTGTCCAGGGACATGTGGA
GGAGCTGTGGGGCCTGGCCACACATCCTAGCAGGGCACAGTTTGTGACCTGTGGGCAGGACAAGCTGGTG
CATCTGTGGAGTTCCGAGACCCACCAGCCAGTGTGGAGCAGGAGCATCGAGGACCCTGCCCGTTCGGCTG
GCTTCCACCCCAGTGGCTCCGTCCTAGCGGTGGGCACAGTGACCGGCAGGTGGCTGCTACTGGACACAGA
GACCCATGACCTGGTGGCTATCCACACAGATGGCAATGAGCAGATCTCCGTGGTCAGCTTTTCACCAGAC
GGGGCGTACCTGGCTGTGGGCTCCCACGACAACTTGGTGTACGTGTACACGGTGGACCAGGGTGGCCGCA
AGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAG
CACCTGCTTTGTCACCAACTCTGGAGACTACGAGATTCTGTACTGGGACCCCGTCACCTGTAAGCAAATC
ACCAGTGCAGACACCGTGAGAAACGTGGAATGGGCTACCGCCACTTGTGTGTTGGGTTTTGGAGTGTTTG
GGATTTGGCCCGAGGGAGCAGATGGCACAGACATCAATGCTGTGGCCCGCTCTCATGATGGGAAGTTGCT
GGTTTCTGCTGACGACTTTGGCAAAGTGCACCTGTTCAGCTACCCCTGCTGTCAGCCGAGAGCCCTCAGC
CACAAATACGGTGGACACAGCAGCCATGTGACTAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTAA
CCACTGGGGGCAAAGACACGAGCGTGCTGCAGTGGCGGGTGGCCTGA

Translation (668 aa):
MSSFGIGKTKEVIFSMEEGSVKMFLRGRPVPMLIPDELAPTYSLDTRSELPSSRLKLDWVYPLTSSLSAL
LEEALGFSSYGYRGRDCRANLYLLPTGEVVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAVHPDMVTIA
TGQVAGTTKEGKPLPPHVRVWDSVSLSTLHVLGLGVFDRAVCCVAFSKSNGGNLLCAVDESNDHVLSVWD
WAKESKVVDSKCSNEAVLVATFHPTDPSLLITCGKSHIYFWSLEGGSLSKRQGLFEKHEKPKYVLCVTFL
EGGDVVTGDSGGNLYVWGKGGNRITQEVQGAHDGGVFALCALRDGTLVSGGGRDRRVVLWGSDYSKVQEV
EVPEDFGPVRTVAEGRGDTLYVGTTRNSILLGSVHTGFSLLVQGHVEELWGLATHPSRAQFVTCGQDKLV
HLWSSETHQPVWSRSIEDPARSAGFHPSGSVLAVGTVTGRWLLLDTETHDLVAIHTDGNEQISVVSFSPD
GAYLAVGSHDNLVYVYTVDQGGRKVSRLGKCSGHSSFITHLDWAQDSTCFVTNSGDYEILYWDPVTCKQI
TSADTVRNVEWATATCVLGFGVFGIWPEGADGTDINAVARSHDGKLLVSADDFGKVHLFSYPCCQPRALS
HKYGGHSSHVTNVAFLWDDSMALTTGGKDTSVLQWRVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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