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Report for CCDS51925.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51925.1 Public Mus musculus 6 Klrc2 23 108 98 CCDS HistoryNCBI Gene:16642Re-query CCDS DB by CCDS ID:51925.1Re-query CCDS DB by GeneID:16642See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51925.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112057.8 ENSMUSP00000107688.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112057.8Link to Ensembl Protein Viewer:ENSMUSP00000107688.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112057Re-query CCDS DB by Protein ID:ENSMUSP00000107688
Original member Current member EBI ENSMUST00000119533.1 ENSMUSP00000112733.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119533.1Link to Ensembl Protein Viewer:ENSMUSP00000112733.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119533Re-query CCDS DB by Protein ID:ENSMUSP00000112733
Original member Current member NCBI NM_010653.4 NP_034783.3 Accepted alive Link to Nucleotide Sequence:NM_010653.4Link to Protein Sequence:NP_034783.3Re-query CCDS DB by Nucleotide ID:NM_010653Re-query CCDS DB by Protein ID:NP_034783Link to BLAST:NP_034783.3

Chromosomal Locations for CCDS 51925.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 129656371 129656488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129656812 129656912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129658666 129658817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129659305 129659379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129659978 129660079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129660388 129660556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (717 nt):
ATGAGTCACCTGCTTGGAACTGAACAGGCCTCAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGCAGT
TCCGTTTCAGTAATGCAGCAGGAGATCGCCTGCTGGAGTTTAGCCTTCAACATGCTTCCCAGAAGCATCT
GAAGGCCAGCAGGCATGGCTACTGCAAAAATTTTGCATCACCTCCAGAGAAGCTCATCGCTGGAATCCTG
GGCACCATCTGGTTTACCTTATTGATTGCTCTAGTAATCTCAACCAGAATTGTTTCTCCATATGCTGAAC
TGAAGAAGCAGATCCACCCCTTCTTGGTTAGAACCCAGAAAGGCTCACACGCCTTGCTCTCCAAAGCACA
GCCTTGTCCTCATTGTCCAAAGGAGTGGATATCATATTCTCACAATTGTTATTTCATTGGTATGGAGAGA
AAATCTTGGAATGACAGTTTGGGGTCCTGCCTTTCCAAAAACTGTAGTCTGCTTCACATAGATAGTGAAG
AGGAGCAGGATTTTCTGCAATCTCTTTCACTGGTCTCATGGACTGGAATCCTTCGGAAGGGCAGAGGTCA
GGCCTGGGACTGGAAAAAAGACTCAATTTTCAAACCAAAGATAGCAGAGATTTCCCATGATGAATGTAAC
TGTGCCATGATGTCAGCTTCTGGTCTCACAGCAGACAACTGTACAACTTTACATCCATATCTTTGTAAGT
GTAAATTCCCCATCTGA

Translation (238 aa):
MSHLLGTEQASEPRKATKKTQAQFRFSNAAGDRLLEFSLQHASQKHLKASRHGYCKNFASPPEKLIAGIL
GTIWFTLLIALVISTRIVSPYAELKKQIHPFLVRTQKGSHALLSKAQPCPHCPKEWISYSHNCYFIGMER
KSWNDSLGSCLSKNCSLLHIDSEEEQDFLQSLSLVSWTGILRKGRGQAWDWKKDSIFKPKIAEISHDECN
CAMMSASGLTADNCTTLHPYLCKCKFPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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