NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS51279.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51279.1 Public Mus musculus 4 Eif2b3 23 108 98 CCDS HistoryNCBI Gene:108067Re-query CCDS DB by CCDS ID:51279.1Re-query CCDS DB by GeneID:108067See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51279.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106448.8 ENSMUSP00000102056.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106448.8Link to Ensembl Protein Viewer:ENSMUSP00000102056.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106448Re-query CCDS DB by Protein ID:ENSMUSP00000102056
Original member Current member NCBI NM_001111277.2 NP_001104747.1 Accepted alive Link to Nucleotide Sequence:NM_001111277.2Link to Protein Sequence:NP_001104747.1Re-query CCDS DB by Nucleotide ID:NM_001111277Re-query CCDS DB by Protein ID:NP_001104747Link to BLAST:NP_001104747.1

Chromosomal Locations for CCDS 51279.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 117022165 117022312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117028411 117028556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117044436 117044595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117052724 117052835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117058764 117058853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117065341 117065468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117066374 117066564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117068744 117068821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117070639 117070787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117081558 117081661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117086689 117086741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGAGTTTCAAGCGGTGGTTATGGCCGTTGGTGGGGGATCTCGGATGACAGACTTGACTTCCAGCATTC
CCAAGCCTCTGCTTCCAGTTGGAAACAAACCTTTAATTTGGTACCCGCTGAACCTGCTTGAGCGTGTTGG
ATTTGAAGAAGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAG
ATGAAGCTAGATATTGTGTGCATTCCTGATGAGGCAGACATGGGGACTGCAGATTCTCTACGACACATCT
ATCCAAAGCTTAAGACCGATGTGCTGGTCCTGAGCTGCGATCTGATAACAGATGTGGCTTTACATGAGGT
TGTGGACCTGTTCAGAGCTTATGATGCGTCACTGGCCATGCTAATGAGGAAAGGACAAGAGAGCATAGAA
CCAGTTCCAGGTCAAAAGGGGAAAAAAAAACCAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCACAG
GAAAAAGGCTGCTCTTTATGGCTAATGAAGCAGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCT
GCAGAAGCACCCTAGGATACATTTCCACACAGGCCTTGTGGATGCCCATCTCTACTGCCTGAAGAAGTAC
GTTGTGGATTTCTTAATGGAGAATAGGTCAATCACTTCTATCCGAAGCGAACTGATTCCATACCTAGTAA
GAAAACAGTTTTCCTCAGCTTCCTCACAGCAAAGGCAGGAAGACAAAGAAGAGGATCTAAAGAAAAAGGA
GCTGAAGTCTTTAGATATTTACAGTTTTATAAAAAAAGACGACACTCTGACCTTGGCTCCCTATGATGCC
TGCTGGAATGCTTTTCGAGGAGACAAATGGGAAGATTTGTCTAGATCACAGGTCCGCTGCTATGTCCACA
TCATGAAAGAAGGACTTTGCTCTCGAGTAAGCACACTGGGACTCTACATGGAAGCCAACAGACAGGTCCC
CAAATTGCTATCTGTTCTTTGTCCGGAGGAATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACAC
CTGATTGGAGCTGATAGCCTCATCGGGCCAGATACACAAATTGGAGAGAAGTCATCTATTAAGCACTCTG
TCATTGGCTCATCCTGTGTCATACGAGACAGAACGTCTATTACCAATTGCCTCCTCATGAACTCTGTCAC
CGTGGAAGAAGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAG
ATCAAGAACTGTTTGGTTGGAAGTGGTCAGAGGATTGAAGCCAAAGCTAAACGAATGAACGAGGTGATCG
TGGGGAATGACCAGCTCATGGAAATCTGA

Translation (452 aa):
MEFQAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTKDVQKALCAEFKMK
MKLDIVCIPDEADMGTADSLRHIYPKLKTDVLVLSCDLITDVALHEVVDLFRAYDASLAMLMRKGQESIE
PVPGQKGKKKPVEQRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKHPRIHFHTGLVDAHLYCLKKY
VVDFLMENRSITSIRSELIPYLVRKQFSSASSQQRQEDKEEDLKKKELKSLDIYSFIKKDDTLTLAPYDA
CWNAFRGDKWEDLSRSQVRCYVHIMKEGLCSRVSTLGLYMEANRQVPKLLSVLCPEESMIHSSAQIVNKH
LIGADSLIGPDTQIGEKSSIKHSVIGSSCVIRDRTSITNCLLMNSVTVEEGSSIHGSVICNNAVIETGAE
IKNCLVGSGQRIEAKAKRMNEVIVGNDQLMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH