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Report for CCDS48292.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
48292.1 |
Public |
Mus musculus |
1 |
Speg |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 48292.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000113590.7 |
ENSMUSP00000109220.1 |
Accepted |
alive |
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NCBI |
NM_001085371.1 |
NP_001078840.1 |
Updated |
not alive |
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NCBI |
NM_001085371.2 |
NP_001078840.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001078840.1 |
861 |
Q62407-2 |
861 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 48292.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2586 nt): ATGAAGAAGCTGTGGGTGAAGAAGCGTTTCCAGAAAACCGGCCATTCCCGCCGGGCCTTTGGCCGACTTA CCCATGACTCGGAGACTGCCGAGGATGACATCAGCGATGTGCCGGGGACCCAGCGCCTGGAGCTTCGGGA TGACAGGGCCTTCAGCACCCCCACGGGGGGCTCTGATACCCTGGTGGGTACCTCCCTGGACACACCCCCG ACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGG AAGCGGGCAGCGGGGGTGGCACCCGCCCCCTCCCAGGCAGCCCAAGGCAAGCACAGACAACCGGGGCCGG GCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGGGCATCGCGAGCTAATCTGGTGGGCGCAAGCTGGGGG TCAGAGGATAGCCTTTCGGTGGCCAGTGACCTCTATGGCAGCGCGTTCAGTCTGTACAGAGGACGGGCGC TCTCGATCCACGTCAGCATTCCTCCGAGTGGATTGCACAGAGAGGAGCCTGACCTTCAGCCTCAGCCAGC CAGTGATGCCCTTCGTCCACGCCCTGCCCTTCCACCTCCCTCCAAATCCGCTTTGCTTCCCCCACCATCT CCTCGGGTGGGAAAGAGGGCTCTGCCAGGACCTAGTACCCAGCCCCCAGCTACTCCCACTTCGCCCCATC GGCGTGCTCAGGAGCCCTCGCTGCCTGAGGACATCACCACCACGGAAGAGAAGCGAGGGAAAAAGCCCAA GTCATCCGGGCCGTCGCTGGCGGGCACAGTGGAGTCCCGGCCCCAGACGCCACTGAGCGAGGCTTCGGGT CGCCTGTCAGCATTGGGCCGCTCGCCCCGGCTGGTGCGCGCGGGGTCCCGCATCCTGGACAAGCTACAGT TCTTCGAAGAGCGGCGACGCAGCCTGGAGCGCAGCGACTCGCCGCCAGCGCCCCTGCGGCCCTGGGTGCC CCTGCGCAAGGCTCGCTCGCTGGAGCAGCCGAAGTCCGAGGGCGGTGCGGCGTGGGGCACACCCGAGGCC TCGCAGGAGGAGCTGCGGTCACCTCGGGGCAGTGTGGCAGAGCGGCGTCGCCTGTTCCAGCAAAAGGCGG CCTCGTTGGATGAACGCACGCGACAACGCAGTGCAACCTCGGACCTCGAACTCCGCTTCGCCCAGGAGCT GGGTCGCATCCGCCGATCTACGTCGCGGGAGGAGCTGGTGCGTTCGCACGAGTCCCTGCGTGCCACGCTG CAGCGCGCCCCATCCCCTCGGGAGCCCGGCGAGCCCCCACTCTTCTCCCGGCCTTCCACACCCAAGACCT CACGGGCTGTGAGCCCGGCTGCCACCCAGCCGCCGCCTCCTAGTGGTGCGGGCAAATCTGGGGACGAGCC TGGGAGGCCCCGAAGCAGAGGGCCGGTGGGCAGGACTGAACCGGGGGAAGGCCCGCAGCAGGAGATCAAG CGTCGGGACCAATTCCCGCTAACCAGGAGCAGAGCCATCCAGGAGTGCAGGAGCCCTGTGCCGCCCTACA CCGCGGATCCCCCGGAGAGCAGGACAAAAGCCCCCTCCGGTCGCAAGCGGGAACCCCCTGCTCAAGCGGT GCGCTTTCTGCCCTGGGCCACTCCGGGAGTGGAGGACTCTGTTCTGCCCCAAACCTTGGAGAAGAATAGA GCGGGACCCGAGGCTGAGAAGAGGCTTCGCAGAGGACCTGAGGAGGATGGCCCCTGGGGGCCCTGGGACC GCAGAGGGACCCGCAGCCAAGGCAAAGGTCGCCGTGCTCGGCCTACTTCCCCCGAGCTCGAGTCCTCAGA CGACTCCTATGTGTCCGCTGGGGAAGAGCCCCTGGAGGCACCCGTGTTTGAGATCCCTCTGCAGAATATG GTGGTGGCGCCAGGAGCTGACGTGCTACTTAAGTGTATCATCACCGCCAACCCCCCACCCCAAGTGTCCT GGAAAAAGGATGGGTCCATGTTGCACAGCGAGGGTCGTCTTCTCATCCGGGCTGAAGGTGAACGGCACAC ACTGCTGCTCAGAGAGGCCCAGGCTGCCGATGCTGGGAGCTACACAGCCACTGCCACCAACGAACTGGGC CAAGCTACCTGTGCTTCTTCACTGGCTGTGAGACCTGGCGGCTCCACATCCCCTTTCAGCAGCCCCATCA CCTCTGATGAGGAGTACCTGAGCCCCCCAGAGGAGTTCCCAGAGCCTGGGGAGACCTGGCCCCGAACCCC TACCATGAAGCTCAGTCCCAGCCAGGATCATGATTCCTCCGACTCTTCTTCCAAGGCACCCCCAACGTTC AAGGTCTCACTCATGGACCAATCGGTGAGAGAAGGTCAAGATGTCATTATGAGCATCCGTGTGCAGGGAG AGCCCAAGCCTGTGGTTTCCTGGCTGAGGAATCGACAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCAGA GGAGGCCGAGGGTGGGCTCTGCCGCTTGAGGATCCTGGCTGCTGAACGGGGCGATGCTGGTTTCTACACA TGCAAGGCGGTCAACGAATATGGCGCTCGGCAGTGCGAGGCCCGCCTGGAGGTCCGAGGCGAGTGA
Translation (861 aa): MKKLWVKKRFQKTGHSRRAFGRLTHDSETAEDDISDVPGTQRLELRDDRAFSTPTGGSDTLVGTSLDTPP TSVTGTSEEQVSWWGSGQTVLEQEAGSGGGTRPLPGSPRQAQTTGAGPRHLGVEPLVRASRANLVGASWG SEDSLSVASDLYGSAFSLYRGRALSIHVSIPPSGLHREEPDLQPQPASDALRPRPALPPPSKSALLPPPS PRVGKRALPGPSTQPPATPTSPHRRAQEPSLPEDITTTEEKRGKKPKSSGPSLAGTVESRPQTPLSEASG RLSALGRSPRLVRAGSRILDKLQFFEERRRSLERSDSPPAPLRPWVPLRKARSLEQPKSEGGAAWGTPEA SQEELRSPRGSVAERRRLFQQKAASLDERTRQRSATSDLELRFAQELGRIRRSTSREELVRSHESLRATL QRAPSPREPGEPPLFSRPSTPKTSRAVSPAATQPPPPSGAGKSGDEPGRPRSRGPVGRTEPGEGPQQEIK RRDQFPLTRSRAIQECRSPVPPYTADPPESRTKAPSGRKREPPAQAVRFLPWATPGVEDSVLPQTLEKNR AGPEAEKRLRRGPEEDGPWGPWDRRGTRSQGKGRRARPTSPELESSDDSYVSAGEEPLEAPVFEIPLQNM VVAPGADVLLKCIITANPPPQVSWKKDGSMLHSEGRLLIRAEGERHTLLLREAQAADAGSYTATATNELG QATCASSLAVRPGGSTSPFSSPITSDEEYLSPPEEFPEPGETWPRTPTMKLSPSQDHDSSDSSSKAPPTF KVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYT CKAVNEYGARQCEARLEVRGE
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