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Report for CCDS40232.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40232.1 Public Mus musculus 8 Gas6 23 108 98 CCDS HistoryNCBI Gene:14456Re-query CCDS DB by CCDS ID:40232.1Re-query CCDS DB by GeneID:14456See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40232.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033828.6 ENSMUSP00000033828.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033828.6Link to Ensembl Protein Viewer:ENSMUSP00000033828.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033828Re-query CCDS DB by Protein ID:ENSMUSP00000033828
Original member Current member NCBI NM_019521.2 NP_062394.2 Accepted alive Link to Nucleotide Sequence:NM_019521.2Link to Protein Sequence:NP_062394.2Re-query CCDS DB by Nucleotide ID:NM_019521Re-query CCDS DB by Protein ID:NP_062394Link to BLAST:NP_062394.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062394.2 674 Q61592 674 100% 0 0

Chromosomal Locations for CCDS 40232.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 13465746 13465900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13466627 13466855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13468192 13468364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13470219 13470387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13471449 13471613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13474657 13474846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13475039 13475157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13476112 13476233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13477044 13477166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13478252 13478374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13479007 13479129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13483674 13483736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13485671 13485695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13493846 13494012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13494261 13494339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGCCGCCACCGCCCGGGCCCGCCGCCGCCCTGGGCACTGCGCTTCTGCTGCTCCTGCTGGCTTCCGAGT
CTTCTCACACTGTGCTGTTGCGGGCGCGTGAGGCGGCGCAGTTTCTGCGGCCCAGGCAGCGCCGCGCCTA
CCAAGTCTTCGAGGAGGCCAAGCAGGGCCACCTGGAACGGGAGTGCGTGGAGGAGGTGTGCAGCAAAGAG
GAGGCCAGAGAGGTGTTCGAGAACGACCCCGAGACGGAGTATTTCTATCCACGATATCAAGAGTGCATGA
GAAAATATGGCAGGCCTGAAGAAAAAAACCCAGATTTCGCCAAATGTGTTCAGAACTTGCCTGACCAGTG
CACCCCAAACCCTTGTGATAAGAAGGGTACTCATATCTGCCAAGACCTCATGGGCAACTTCTTCTGCGTG
TGCACAGATGGCTGGGGAGGCCGGCTCTGTGACAAAGATGTCAATGAGTGTGTCCAGAAGAATGGGGGCT
GCAGCCAGGTCTGCCACAACAAACCAGGAAGCTTCCAATGTGCCTGCCATAGTGGCTTCTCGCTTGCATC
AGACGGCCAGACCTGCCAAGATATCGATGAATGCACAGACTCAGACACCTGTGGGGACGCGCGATGCAAG
AACTTGCCAGGCTCCTACTCTTGCCTCTGCGATGAGGGATATACATACAGCTCCAAGGAGAAGACCTGCC
AAGATGTGGACGAGTGCCAGCAGGATCGCTGTGAGCAGACCTGTGTCAACTCCCCAGGCAGCTATACCTG
CCACTGTGATGGGCGAGGGGGCCTAAAACTATCCCCAGACATGGATACTTGTGAGGACATCTTACCATGT
GTGCCCTTCAGCATGGCCAAGAGCGTGAAGTCCTTGTACCTGGGCCGCATGTTCAGCGGGACCCCCGTGA
TTAGACTACGCTTCAAGAGGCTTCAGCCTACCAGGCTGCTGGCTGAATTTGACTTCCGCACTTTTGACCC
TGAAGGAGTCCTCTTCTTCGCTGGAGGCCGTTCAGACAGCACCTGGATTGTCCTGGGCCTAAGAGCTGGG
CGGCTTGAGCTGCAGCTTCGGTACAATGGCGTTGGGCGCATCACCAGCAGCGGGCCAACCATCAACCACG
GCATGTGGCAAACTATCTCCGTGGAAGAGCTGGAACGTAACCTTGTCATCAAGGTCAACAAAGATGCTGT
AATGAAGATCGCGGTAGCTGGGGAGCTGTTTCAGCTGGAGAGGGGCCTCTATCACCTGAATCTCACCGTG
GGCGGCATTCCCTTCAAGGAGAGTGAGCTCGTCCAGCCGATTAACCCTCGCCTGGATGGGTGCATGAGGA
GTTGGAACTGGCTGAACGGGGAAGACAGCGCCATCCAGGAGACAGTCAAGGCAAACACAAAAATGCAGTG
CTTCTCTGTGACAGAAAGGGGCTCCTTCTTCCCGGGGAATGGATTTGCTACCTACAGGCTCAACTACACC
CGAACATCGCTGGATGTCGGCACGGAAACCACCTGGGAAGTTAAAGTTGTGGCTCGGATCCGCCCTGCCA
CGGACACGGGGGTGCTGCTGGCGCTGGTGGGGGACGACGATGTCGTCCCCATCTCTGTGGCCCTAGTCGA
CTACCACTCTACAAAGAAGCTCAAGAAGCAGTTGGTGGTCCTGGCAGTTGAGGATGTTGCCCTGGCACTG
ATGGAAATCAAGGTGTGCGACAGCCAGGAACACACGGTCACTGTCTCCCTGCGGGAGGGTGAGGCCACCC
TAGAAGTGGATGGCACAAAGGGCCAGAGTGAAGTGAGCACTGCCCAGCTGCAGGAGCGACTGGACACACT
TAAGACACATCTGCAAGGCTCTGTGCACACCTATGTTGGAGGCCTGCCAGAAGTATCGGTGATTTCTGCA
CCCGTCACTGCGTTCTACCGCGGATGCATGACTCTGGAGGTAAACGGGAAAATCCTGGACCTGGATACGG
CCTCGTACAAGCACAGTGACATCACCTCCCACTCCTGCCCGCCTGTGGAGCATGCCACCCCCTAG

Translation (674 aa):
MPPPPGPAAALGTALLLLLLASESSHTVLLRAREAAQFLRPRQRRAYQVFEEAKQGHLERECVEEVCSKE
EAREVFENDPETEYFYPRYQECMRKYGRPEEKNPDFAKCVQNLPDQCTPNPCDKKGTHICQDLMGNFFCV
CTDGWGGRLCDKDVNECVQKNGGCSQVCHNKPGSFQCACHSGFSLASDGQTCQDIDECTDSDTCGDARCK
NLPGSYSCLCDEGYTYSSKEKTCQDVDECQQDRCEQTCVNSPGSYTCHCDGRGGLKLSPDMDTCEDILPC
VPFSMAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLLAEFDFRTFDPEGVLFFAGGRSDSTWIVLGLRAG
RLELQLRYNGVGRITSSGPTINHGMWQTISVEELERNLVIKVNKDAVMKIAVAGELFQLERGLYHLNLTV
GGIPFKESELVQPINPRLDGCMRSWNWLNGEDSAIQETVKANTKMQCFSVTERGSFFPGNGFATYRLNYT
RTSLDVGTETTWEVKVVARIRPATDTGVLLALVGDDDVVPISVALVDYHSTKKLKKQLVVLAVEDVALAL
MEIKVCDSQEHTVTVSLREGEATLEVDGTKGQSEVSTAQLQERLDTLKTHLQGSVHTYVGGLPEVSVISA
PVTAFYRGCMTLEVNGKILDLDTASYKHSDITSHSCPPVEHATP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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