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Report for CCDS40128.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40128.2 |
Public |
Mus musculus |
7 |
Sult1a1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:20887](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:40128.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:20887](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 40128.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000106373.8 |
ENSMUSP00000101981.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000106373.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000101981.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000106373](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000101981](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_133670.2 |
NP_598431.2 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_133670.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_598431.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_133670](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_598431](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_133670.3 |
NP_598431.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_133670.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_598431.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_133670](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_598431](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_598431.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 40128.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (897 nt): ATGGCTCAGAACCCCAGCAACATGGAGCCCTTGCGTAAACCACTGGTGCCTGTGAAGGGAATCCCACTCA TCAAATACTTTGCGGAGACAATGGAGCAACTGCAGAACTTCACAGCCTGGCCTGATGATGTGCTCATCAG CACGTACCCAAAGTCTGGTACTACCTGGATGAGTGAGATCATGGATATGATCTATCAGGGTGGCAAGCTA GATAAGTGTGGCCGGGCCCCCGTCTATGCCCGGATACCCTTCCTTGAGTTCAGCTGCCCAGGGGTCCCCC CAGGTCTTGAAACTCTGAAAGAGACACCAGCCCCACGGATCATTAAGACACATCTGCCCTTGTCCTTACT CCCTCAGAGTCTGCTGGATCAAAAGATCAAGGTGATCTACGTTGCCCGAAATGCAAAGGATGTGGTTGTC TCCTATTATAACTTCTACAAAATGGCCAAGCTGCACCCTGACCCAGGCACCTGGGAAAGCTTCTTGGAGA ACTTCATGGATGGGAAAGTGTCCTATGGGTCGTGGTACCAGCACGTGAAGGAGTGGTGGGAGCTGAGACG CACTCACCCTGTTCTCTATCTCTTCTATGAAGACATGAAGGAGAATCCCAAAAGGGAGATCAAGAAGATT CTAGAGTTTCTGGGGCGCTCTCTACCTGAGGAGACTGTGGATTTAATTGTTCACCACACATCCTTCAAGA AAATGAAGGAGAACCCCATGGCTAACTACACAACCATCCCAACTGAAGTTATGGACCACACTATTTCTCC CTTCATGAGGAAAGGTACCATTGGGGACTGGAAAAATACCTTCACTGTAGCCCAGAGTGAGCACTTTGAT GCCCACTATGCCAAGATAATGACAGGTTGTGACTTCACGTTCCGCTGTCAAATATGA
Translation (298 aa): MAQNPSNMEPLRKPLVPVKGIPLIKYFAETMEQLQNFTAWPDDVLISTYPKSGTTWMSEIMDMIYQGGKL DKCGRAPVYARIPFLEFSCPGVPPGLETLKETPAPRIIKTHLPLSLLPQSLLDQKIKVIYVARNAKDVVV SYYNFYKMAKLHPDPGTWESFLENFMDGKVSYGSWYQHVKEWWELRRTHPVLYLFYEDMKENPKREIKKI LEFLGRSLPEETVDLIVHHTSFKKMKENPMANYTTIPTEVMDHTISPFMRKGTIGDWKNTFTVAQSEHFD AHYAKIMTGCDFTFRCQI
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