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Report for CCDS39679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39679.1 Public Mus musculus 6 Dusp16 23 108 98 CCDS HistoryNCBI Gene:70686Re-query CCDS DB by CCDS ID:39679.1Re-query CCDS DB by GeneID:70686See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39679.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100857.9 ENSMUSP00000098419.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100857.9Link to Ensembl Protein Viewer:ENSMUSP00000098419.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100857Re-query CCDS DB by Protein ID:ENSMUSP00000098419
Original member Current member NCBI NM_130447.3 NP_569714.2 Accepted alive Link to Nucleotide Sequence:NM_130447.3Link to Protein Sequence:NP_569714.2Re-query CCDS DB by Nucleotide ID:NM_130447Re-query CCDS DB by Protein ID:NP_569714Link to BLAST:NP_569714.2

Chromosomal Locations for CCDS 39679.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 134717884 134719051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134720494 134720617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134725836 134725995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134739812 134739975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134758619 134758757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134760846 134761073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1983 nt):
ATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGCTTGGTGGCTCTGCTGGAAAGTGGAACGG
AAAAAGTGCTGCTAATTGATAGCCGACCATTTGTGGAATACAATACGTCTCACATTTTGGAAGCCATTAA
TATCAACTGCTCCAAACTGATGAAGCGAAGGTTGCAACAGGACAAAGTATTAATTACAGAACTTATCCAA
CATTCTGCAAAGCATAAGGTTGACATTGACTGCAATCAGAAGGTGGTAGTTTATGATCAAAGTTCCCAAG
ATGTTGGTTCTCTGTCGTCAGACTGCTTTCTCACTGTACTTCTGGGTAAACTGGAGAGGAGCTTCAACTC
TGTCCACCTGCTTGCAGGTGGCTTTGCTGAGTTCTCTCGTTGTTTCCCTGGCCTCTGTGAAGGAAAGTCC
ACTCTAGTCCCTACCTGCATATCTCAGCCTTGCTTACCTGTTGCGAACATTGGGCCAACTCGAATTCTTC
CCAATCTCTATCTTGGCTGCCAGCGAGATGTCCTCAACAAGGACCTGATGCAACAGAATGGGATTGGCTA
TGTGTTAAATGCCAGCAATACCTGTCCAAAGCCTGACTTCATACCTGAATCTCACTTCCTGCGAGTGCCT
GTGAATGACAGCTTTTGTGAGAAAATCCTACCATGGTTGGACAAGTCTGTGGATTTCATTGAGAAAGCAA
AAGCCTCCAATGGCTGTGTGCTTATCCACTGCTTAGCTGGGATCTCTCGCTCCGCCACTATTGCTATTGC
CTACATCATGAAGAGGATGGACATGTCTCTAGATGAGGCTTACAGATTTGTGAAAGAAAAAAGACCTACT
ATATCTCCGAATTTTAATTTTATGGGCCAACTCATGGACTATGAGAAGACGATTAATAACCAGACTGGAA
TGTCAGGGCCAAAGAGCAAACTGAAGCTGCTGCACCTAGACAAACCCAGTGAGCCCGTGCCTGCAGCCTC
AGAGGGCGGATGGAAGAGTGCACTGTCTCTCAGTCCACCCTGTGCCAACTCGACCTCGGAGGCATCAGGG
CAAAGGCTTGTGCATCCTGCAAGTGTGCCCAGCTTACAGCCGTCACTCTTAGAGGACAGTCCGCTGGTAC
AGGCGCTCAGTGGGCTCCAGCTGTCCTCAGAGAAGCTGGAAGACAGCACTAAGCTCAAGCGTTCCTTCTC
TCTCGATATCAAATCTGTTTCATATTCAGCCAGTATGGCCGCGTCCCTACACGGCTTCTCGTCAGAGGAG
GCTTTAGACTACTACAAACCTTCTGCCACACTGGATGGGACCAACAAGCTCTGCCAGTTCTCCCCCGTTC
AGGAGGTATCAGAACAGAGTCCAGAGACCAGCCCGGATAAGGAGGAGGCCCACATCCCCAAGCAGCCCCA
ACCTCCCAGGCCTTCTGAGAGCCAGGTCACACGCTTGCACTCAGTGAGAACCGGCAGTAGTGGGTCCACC
CAGAGGCCCTTCTTCTCGCCACTGCATCGGAGCGGGAGTGTAGAGGACAATTACCATACCAACTTCCTTT
TTGGCCTTTCCACCAGCCAGCAACACCTCACCAAGTCTGCAGGGCTTGGCCTCAAGGGCTGGCACTCAGA
TATTCTGGCTCCCCAGTCCTCTGCCCCCTCCCTGACCAGCAGTTGGTATTTTGCTACGGAGCCTTCACAC
TTGTACTCTGCTTCAGCCATCTATGGAGGCAACAGCAGTTACTCTGCCTACAGCTGTGGCCAGCTGCCCA
CTTGCAGTGACCAAATCTATTCTGTTCGTAGGCGGCAGAAGCCTACTGACAGAGCTGACTCGAGGCGGAG
CTGGCATGAAGAGAGCCCCTTTGAAAAGCAGTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAGAGC
ATTATGTCGGAGAACAGGTCCAGGGAGGAGCTGGGCAAGGTGGGCAGCCAGTCCAGCTTCTCCGGCAGCA
TGGAGATCATCGAGGTCTCTTGA

Translation (660 aa):
MAHEMIGTQIVTESLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQ
HSAKHKVDIDCNQKVVVYDQSSQDVGSLSSDCFLTVLLGKLERSFNSVHLLAGGFAEFSRCFPGLCEGKS
TLVPTCISQPCLPVANIGPTRILPNLYLGCQRDVLNKDLMQQNGIGYVLNASNTCPKPDFIPESHFLRVP
VNDSFCEKILPWLDKSVDFIEKAKASNGCVLIHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPT
ISPNFNFMGQLMDYEKTINNQTGMSGPKSKLKLLHLDKPSEPVPAASEGGWKSALSLSPPCANSTSEASG
QRLVHPASVPSLQPSLLEDSPLVQALSGLQLSSEKLEDSTKLKRSFSLDIKSVSYSASMAASLHGFSSEE
ALDYYKPSATLDGTNKLCQFSPVQEVSEQSPETSPDKEEAHIPKQPQPPRPSESQVTRLHSVRTGSSGST
QRPFFSPLHRSGSVEDNYHTNFLFGLSTSQQHLTKSAGLGLKGWHSDILAPQSSAPSLTSSWYFATEPSH
LYSASAIYGGNSSYSAYSCGQLPTCSDQIYSVRRRQKPTDRADSRRSWHEESPFEKQFKRRSCQMEFGES
IMSENRSREELGKVGSQSSFSGSMEIIEVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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