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Report for CCDS39533.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39533.1 Public Mus musculus 6 Mob1a 23 108 98 CCDS HistoryNCBI Gene:232157Re-query CCDS DB by CCDS ID:39533.1Re-query CCDS DB by GeneID:232157See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39533.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055261.10 ENSMUSP00000054452.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055261.10Link to Ensembl Protein Viewer:ENSMUSP00000054452.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000055261Re-query CCDS DB by Protein ID:ENSMUSP00000054452
Original member Current member EBI ENSMUST00000101245.3 ENSMUSP00000098802.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101245.3Link to Ensembl Protein Viewer:ENSMUSP00000098802.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000101245Re-query CCDS DB by Protein ID:ENSMUSP00000098802
Original member NCBI NM_145571.2 NP_663546.1 Updated not alive Link to Nucleotide Sequence:NM_145571.2Link to Protein Sequence:NP_663546.1Re-query CCDS DB by Nucleotide ID:NM_145571Re-query CCDS DB by Protein ID:NP_663546
Current member NCBI NM_145571.3 NP_663546.1 Accepted alive Link to Nucleotide Sequence:NM_145571.3Link to Protein Sequence:NP_663546.1Re-query CCDS DB by Nucleotide ID:NM_145571Re-query CCDS DB by Protein ID:NP_663546Link to BLAST:NP_663546.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663546.1 216 Q921Y0-1 216 100% 0 0

Chromosomal Locations for CCDS 39533.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 83326254 83326267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83329867 83330033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83332454 83332547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83334076 83334209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83338281 83338444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83340176 83340253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGAGCTTCCTCTTCAGCAGCCGCTCTTCGAAAACATTCAAACCAAAGAAGAATATCCCTGAAGGGTCCC
ATCAGTATGAGCTCTTGAAGCATGCAGAGGCGACTCTCGGAAGTGGCAATCTGAGGCAAGCTGTTATGTT
GCCTGAGGGAGAGGACCTCAATGAATGGATTGCTGTTAATACTGTGGATTTCTTCAATCAGATCAACATG
TTGTATGGAACCATTACAGAATTCTGCACTGAGGCAAGCTGCCCAGTCATGTCGGCAGGTCCCAGGTATG
AATACCACTGGGCAGATGGCACTAATATTAAAAAGCCAATTAAGTGTTCTGCACCAAAATATATTGACTA
TTTGATGACTTGGGTTCAGGATCAGCTTGATGACGAAACTCTTTTTCCTTCTAAGATTGGTGTCCCTTTT
CCCAAAAACTTTATGTCTGTGGCAAAGACTATTCTGAAGCGTCTCTTCAGGGTTTATGCCCATATCTACC
ACCAGCACTTTGACTCCGTGATGCAGCTGCAGGAGGAGGCTCACCTCAACACCTCCTTTAAGCACTTTAT
TTTCTTTGTTCAGGAGTTTAATCTGATTGATAGGCGTGAGTTGGCACCACTTCAGGAATTAATTGAGAAG
CTTGGATCTAAAGACAGATAA

Translation (216 aa):
MSFLFSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINM
LYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPF
PKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEK
LGSKDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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