CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS38040.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
38040.1 |
Public |
Mus musculus |
2 |
Dhtkd1 |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 38040.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000026924.6 |
ENSMUSP00000026924.5 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000095147.8 |
ENSMUSP00000092769.2 |
Accepted |
alive |
|
|
|
NCBI |
NM_001081131.2 |
NP_001074600.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001074600.1 |
921 |
A2ATU0 |
921 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 38040.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2766 nt): ATGGCATCGGCCGCCACTGTGGCAGCTGCAGGGAGAGCTCTCCGCCGGGCCGTTCTGCTTCTCCGGCGCG GTTACCAGACGGAGAGGGGCGTCTATGGATACCGGCCTAGGAAAGCCAAGAGCGGAGAGCCTCGAGGCGA CCGTGCACGCCCCTCAGTTGACCATGGCCTTGCCAGGCTGGTGACAGTGTATTGTGAGCATGGCCACAAA GCTGCCCAGATCAACCCTCTCTTCCCTGGACAAGCCCTCCTGGATACTGTGCCTGAAATCCAAGCTCTTG TCCGGACACTCCAGGGACCCTTCACTACCACAGGACTGTTAAACCTGGGCAAAGAAGCAGCTTCTCTTGA GGAAGTATTGGCCTATCTGAACCATATCTACTGTGGCCCAATTTCTATCGAAACCGCCCAGCTTCAGAGC CAGGAAGAGAGAGACTGGTTTGCCAGAAGGTTTGAGGAACTGAAAAAGGAGACGTTCACCACAGAAGAAC GAAAATACCTGTCCAAACTATTGCTAGAGTCTCAGGAGTTTGACCACTTTTTGGCCACCAAGTTTGCCAC GGTGAAGAGATACGGCGGTGAAGGGGCAGAGAGCATGATGGGCTTTTTTCATGAGTTGCTGAAATTGTCA GCCTATGGCGGTATAACCGACATCATTATCGGGATGCCCCATAGAGGGAGGTTGAATTTGTTGACAGGCC TTCTGCAGTTACCTCCGGAGCTGATGTTCCGTAAAATGCGAGGCTTAAGCGAGTTTCCAGAGAATGTTGC CACCATTGGTGATGTCCTGTCCCACCTGACCTCCTCAGTGGACCTAGACTTCGGTGCCCATCAACCCCTC CATGTGACAATGCTGCCCAACCCCTCACATCTGGAAGCTGTTAACCCCGTGGCTGTAGGGAAAACTCGTG GCAGGCAGCAGTCTCGGGAAGATGGGGACTACTCCCCGAATGGTTCTGCTCAGCCTGGGGACAAAGTCAT ATGCCTGCAGGTCCACGGTGACGCTTCCTTCTGCGGTCAGGGGATTGTCCTTGAGACGTTCACACTCTCT AATCTTCCACACTTCAGAATTGGTGGGAGCATCCATCTAATTGTCAATAACCAGCTGGGCTACACCACTC CTGCAGAGAGAGGAAGGTCGTCCTTATACAGCTCTGATATCGGAAAGCTCGTAGGCTGTGCCATCATCCA TGTCAATGGAGACAGCCCAGAGGAAGTGGTCCGAGCGACACGCCTGGCTTTTGAATATCAGCGCCAGTTC CGCAAGGATGTGATTGTTGATTTGTTATGCTATAGGCAGTGGGGTCATAACGAGCTAGACGAGCCTTTCT TCACCAACCCAGTCATGTACAAAATCATCAGAGCCCGCAAGAGCATTCCTGATACCTACGCAGAGCACCT CATTGCCAGTGGACTCATGACCCAGGAGGAGGTTTCCGACATAAAAACCTCCTACTATACCAAGTTAAAT GACCACTTGGCCAATGTGGCCCACTACAGCCCCCCGGCCACTAACCTGCAGGCCCGCTGGCAGGGCCTGG TGCAGCCAGAAGCATGTGTCACCACCTGGGACACAGGGGTGCCTCTAGAGCTGCTGCGGTTTATTGGTGT GAAGTCCGTGGAGGTTCCAGAGGAACTGCAGGTGCACAGCCACCTTCTAAAGATGTATGTTCAGTCAAGA ATGGAGAAGGTGAAGAATGGAAGCGGTCTAGACTGGGCCACCGCAGAGACACTTGCCTTGGGCTCCTTAC TCGCTCAAGGTTTCAATGTTCGTCTGAGCGGCCAAGATGTTGGCCGTGGGACTTTTAGTCAAAGGCATGC CATGGTGGTTTGCCAGGACACTGATGATGCCTACATCCCGCTGAACCACATGGACCCCAACCAGAAGGGT TTTCTGGAGGTTAGCAACAGCCCCCTGTCAGAAGAGGCTGTCCTGGGATTTGAATATGGGATGAGCATCG AAAGCCCCACGTTGCTGCCCCTCTGGGAAGCTCAGTTTGGCGATTTCTTCAATGGAGCCCAGATCATCTT TGACACATTCATCTCAGGAGGAGAGGCCAAGTGGCTCCTGCAGAGTGGCCTCGTCATCCTCCTTCCACAT GGCTATGATGGAGCTGGGCCTGAGCACTCATCTTGTCGGATAGAGCGCTTCTTGCAGATGTGCGATAGTG CAGAAGAAGGTGTGGACAGCGACACTGTGAACATGTTTGTGGTACACCCGACCACCCCTGCTCAGTACTT CCATTTGCTAAGAAGGCAGATGATTCGGAACTTCAGAAAACCTCTCATTGTTGCATCTCCAAAAATGTTA CTCAGGTACCCTGCAGCTGTGTCAACTCTTGAGGAAATGGCACCAGGAACAGCATTCAAACCTGTCATTG GTGATTCATCAGTAGACCCAAAAAATGTTAAAACCCTCATATTCTGCTCCGGCAAACATTTTTATGCCCT GCTGAAGCAAAGAGAGTCTCTGGGGACTAAGAAACATGATTTTGCCATCATTCGACTAGAGGAGCTCTGC CCTTTCCCGCTGGATGCATTACAACAAGAGATGAGCAAATATAAACATGTTCGAGATGTCATCTGGAGTC AGGAGGAGCCGCAGAACATGGGTCCATGGTCTTTTGTTTCTCCAAGGTTTGAAAAACAACTGGCTTGCAG GCTCCGTCTTGTAAGCCGACCCCCTTTGCCAGCACCTGCGGTAGGAATTGGCACAGTGCACCAGCAGCAG CACGAAGACATTCTCTCCAAGACCTTCACTCAGTAA
Translation (921 aa): MASAATVAAAGRALRRAVLLLRRGYQTERGVYGYRPRKAKSGEPRGDRARPSVDHGLARLVTVYCEHGHK AAQINPLFPGQALLDTVPEIQALVRTLQGPFTTTGLLNLGKEAASLEEVLAYLNHIYCGPISIETAQLQS QEERDWFARRFEELKKETFTTEERKYLSKLLLESQEFDHFLATKFATVKRYGGEGAESMMGFFHELLKLS AYGGITDIIIGMPHRGRLNLLTGLLQLPPELMFRKMRGLSEFPENVATIGDVLSHLTSSVDLDFGAHQPL HVTMLPNPSHLEAVNPVAVGKTRGRQQSREDGDYSPNGSAQPGDKVICLQVHGDASFCGQGIVLETFTLS NLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQF RKDVIVDLLCYRQWGHNELDEPFFTNPVMYKIIRARKSIPDTYAEHLIASGLMTQEEVSDIKTSYYTKLN DHLANVAHYSPPATNLQARWQGLVQPEACVTTWDTGVPLELLRFIGVKSVEVPEELQVHSHLLKMYVQSR MEKVKNGSGLDWATAETLALGSLLAQGFNVRLSGQDVGRGTFSQRHAMVVCQDTDDAYIPLNHMDPNQKG FLEVSNSPLSEEAVLGFEYGMSIESPTLLPLWEAQFGDFFNGAQIIFDTFISGGEAKWLLQSGLVILLPH GYDGAGPEHSSCRIERFLQMCDSAEEGVDSDTVNMFVVHPTTPAQYFHLLRRQMIRNFRKPLIVASPKML LRYPAAVSTLEEMAPGTAFKPVIGDSSVDPKNVKTLIFCSGKHFYALLKQRESLGTKKHDFAIIRLEELC PFPLDALQQEMSKYKHVRDVIWSQEEPQNMGPWSFVSPRFEKQLACRLRLVSRPPLPAPAVGIGTVHQQQ HEDILSKTFTQ
|