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Report for CCDS37630.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37630.2 Under review, update Mus musculus 17 Slc35b2 23 108 98 CCDS HistoryNCBI Gene:73836Re-query CCDS DB by CCDS ID:37630.2Re-query CCDS DB by GeneID:73836See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 37630.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000224905.1 ENSMUSP00000153367.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000224905.1Link to Ensembl Protein Viewer:ENSMUSP00000153367.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000224905Re-query CCDS DB by Protein ID:ENSMUSP00000153367
Original member Current member NCBI NM_001357105.1 NP_001344034.1 Pending alive Link to Nucleotide Sequence:NM_001357105.1Link to Protein Sequence:NP_001344034.1Re-query CCDS DB by Nucleotide ID:NM_001357105Re-query CCDS DB by Protein ID:NP_001344034Link to BLAST:NP_001344034.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344034.1 431 Q91ZN5-1 431 100% 0 0

Chromosomal Locations for CCDS 37630.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45564058 45564068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45564580 45564773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45564925 45565079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45566309 45567244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGGACGCCAGATGGTGGGCAGTAGTGGTACTCGCCACACTCCCTTCCTTGGGAGCAGGTGGAGAGTCAC
CCGAAGCCCCTCCGCAGTCCTGGACACAGCTGTGGCTCTTCCGCTTCTTGTTGAATGTAGCGGGCTATGC
CAGCTTTATGGTACCTGGCTACCTCCTGGTGCAGTACTTAAGACGGAAGAACTACCTGGAGACAGGCAGG
GGTCTCTGCTTCCCCCTGGTGAAAGCCTGTGTGTTTGGCAATGAGCCCAAGGCTCCTGATGAGGTTCTCC
TGGCTCCGCGGACAGAGACAGCGGAATCCACCCCGTCTTGGCAGGTCCTGAAGCTGGTCTTCTGTGCCTC
GGGTCTCCAGGTGTCCTATCTGACTTGGGGCATACTGCAGGAAAGAGTGATGACTGGCAGCTACGGGGCC
ACAGCCACATCACCAGGAGAGCATTTCACAGACTCCCAGTTTCTGGTGCTGATGAACCGTGTGCTGGCGC
TGGTTGTGGCAGGCCTCTACTGTGTCCTGCGCAAGCAGCCCCGTCATGGTGCACCCATGTACCGGTACTC
CTTTGCCAGTCTGTCAAATGTGCTTAGCAGCTGGTGCCAGTATGAAGCACTTAAGTTCGTCAGCTTCCCT
ACCCAGGTGCTGGCGAAGGCCTCCAAGGTGATCCCTGTCATGATGATGGGAAAGCTGGTGTCCCGGCGCA
GCTATGAACACTGGGAATACCTGACTGCCGGCCTCATCTCCATTGGAGTGAGCATGTTTCTTCTATCCAG
TGGACCAGAGCCTAGAAGCTCTCCAGCCACCACACTCTCTGGCTTGGTCCTACTGGCAGGCTATATTGCT
TTCGACAGCTTCACCTCAAATTGGCAGGATGCCCTGTTTGCCTATAAGATGTCATCGGTGCAGATGATGT
TTGGGGTCAATTTATTCTCCTGTCTTTTCACAGTAGGCTCACTACTGGAACAGGGGGCCCTACTGGAGGG
GGCACGCTTCATGGGGCGGCACAGTGAGTTTGCGCTCCATGCTCTCCTCCTCTCCATCTGCTCCGCCTTT
GGGCAGCTCTTCATCTTCTACACCATTGGACAATTTGGAGCTGCTGTCTTCACTATCATCATGACTCTAC
GCCAGGCTATTGCCATCCTCCTCTCCTGCCTCCTCTATGGCCATACTGTCACTGTGGTGGGGGGACTGGG
AGTAGCTGTGGTCTTCACTGCCCTCCTACTCAGAGTCTATGCCCGGGGCCGGAAGCAGCGGGGAAAGAAG
GCTGTGCCCACTGAGCCCCCAGTACAGAAGGTGTGA

Translation (431 aa):
MDARWWAVVVLATLPSLGAGGESPEAPPQSWTQLWLFRFLLNVAGYASFMVPGYLLVQYLRRKNYLETGR
GLCFPLVKACVFGNEPKAPDEVLLAPRTETAESTPSWQVLKLVFCASGLQVSYLTWGILQERVMTGSYGA
TATSPGEHFTDSQFLVLMNRVLALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP
TQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLLSSGPEPRSSPATTLSGLVLLAGYIA
FDSFTSNWQDALFAYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEFALHALLLSICSAF
GQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKK
AVPTEPPVQKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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